RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 CYP2C19P33261 490 aa17.84■□□□□ 0.45
LINC01565-201ENST00000356020 FMR1Q06787 632 aaKnown RBP eCLIP17.84■□□□□ 0.45
LINC01565-201ENST00000356020 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
LINC01565-201ENST00000356020 ZNF654Q8IZM8 581 aa17.84■□□□□ 0.45
LINC01565-201ENST00000356020 PPP2R2CQ9Y2T4 447 aa17.84■□□□□ 0.45
LINC01565-201ENST00000356020 GOLGA6L9A6NEM1 432 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
LINC01565-201ENST00000356020 NR5A1Q13285 461 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 PTPN21Q16825 1174 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 LAMB2P55268 1798 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 VWA3AA6NCI4 1184 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 ACTN4O43707 911 aaKnown RBP17.83■□□□□ 0.44
LINC01565-201ENST00000356020 SLC20A2Q08357 652 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 FANCBQ8NB91 859 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 BAG1Q99933 345 aaPredicted RBP17.83■□□□□ 0.44
LINC01565-201ENST00000356020 FHOD1Q9Y613 1164 aa17.83■□□□□ 0.44
LINC01565-201ENST00000356020 FANCGO15287 622 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 TPM1P09493 284 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 ARHGAP29Q52LW3 1261 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 COL22A1Q8NFW1 1626 aaPredicted RBP17.82■□□□□ 0.44
LINC01565-201ENST00000356020 ATP8B1O43520 1251 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 STX10O60499 249 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 CDK11BP21127 795 aaKnown RBP17.82■□□□□ 0.44
LINC01565-201ENST00000356020 CLCN6P51797 869 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 HSPA2P54652 639 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
LINC01565-201ENST00000356020 TSPYL1Q9H0U9 437 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 RTL9Q8NET4 1388 aa17.82■□□□□ 0.44
LINC01565-201ENST00000356020 PPARAQ07869 468 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 HSP90AA4PQ58FG1 418 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
LINC01565-201ENST00000356020 CCDC82Q8N4S0 544 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 TC2NQ8N9U0 490 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 MNS1Q8NEH6 495 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 OXER1Q8TDS5 423 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 NUP133Q8WUM0 1156 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 UBAC1Q9BSL1 405 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 RNF26Q9BY78 433 aaPredicted RBP17.81■□□□□ 0.44
LINC01565-201ENST00000356020 SEC31BQ9NQW1 1179 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 PARP3Q9Y6F1 533 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 TADA3O75528 432 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 URI1O94763 535 aaPredicted RBP17.81■□□□□ 0.44
LINC01565-201ENST00000356020 PNMA6AP0CW24 399 aaPredicted RBP17.81■□□□□ 0.44
LINC01565-201ENST00000356020 PLCD1P51178 756 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 TEX35Q5T0J7 233 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 TRMT44Q8IYL2 757 aaKnown RBP17.81■□□□□ 0.44
LINC01565-201ENST00000356020 SPATA20Q8TB22 786 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 UBXN4Q92575 508 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
LINC01565-201ENST00000356020 BCAMP50895 628 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 IRX5P78411 483 aaPredicted RBP17.8■□□□□ 0.44
LINC01565-201ENST00000356020 PPP2R5BQ15173 497 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 GRAMD1CQ8IYS0 662 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 MIGA1Q8NAN2 632 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 DOT1LQ8TEK3 1739 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
LINC01565-201ENST00000356020 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 PDILTQ8N807 584 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 CSRNP2Q9H175 543 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 CABP5Q9NP86 173 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
LINC01565-201ENST00000356020 TULP2O00295 520 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 ZRANB2O95218 330 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC01565-201ENST00000356020 SEC23AQ15436 765 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 MED15Q96RN5 788 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC01565-201ENST00000356020 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 ANAPC4Q9UJX5 808 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 TNKSO95271 1327 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 BCL9LQ86UU0 1499 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 IGHMBP2P38935 993 aaKnown RBP17.79■□□□□ 0.44
LINC01565-201ENST00000356020 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
LINC01565-201ENST00000356020 CCDC152Q4G0S7 254 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 CT47A1Q5JQC4 288 aaPredicted RBP17.79■□□□□ 0.44
LINC01565-201ENST00000356020 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
LINC01565-201ENST00000356020 ERICH4A6NGS2 130 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 XBP1P17861 261 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 ATP2B1P20020 1258 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 USP49Q70CQ1 688 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 ESR2Q92731 530 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 CARD6Q9BX69 1037 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 ST7Q9NRC1 585 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 COL14A1Q05707 1796 aaKnown RBP17.78■□□□□ 0.44
LINC01565-201ENST00000356020 DLEC1Q9Y238 1755 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 TRIM75PA6NK02 468 aa17.78■□□□□ 0.44
LINC01565-201ENST00000356020 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
LINC01565-201ENST00000356020 SAMSN1Q9NSI8 373 aaKnown RBP17.78■□□□□ 0.44
LINC01565-201ENST00000356020 CICQ96RK0 1608 aaPredicted RBP17.78■□□□□ 0.44
LINC01565-201ENST00000356020 A0A1B0GTH6 734 aa17.77■□□□□ 0.44
LINC01565-201ENST00000356020 CYP7A1P22680 504 aa17.77■□□□□ 0.44
LINC01565-201ENST00000356020 ADKP55263 362 aaKnown RBP17.77■□□□□ 0.44
LINC01565-201ENST00000356020 NR1I3Q14994 352 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms