RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 DMTNQ08495 405 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 SMCR8Q8TEV9 937 aaPredicted RBP13.89□□□□□ -0.19
COLCA1-201ENST00000355430 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
COLCA1-201ENST00000355430 PSMA7O14818 248 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 PABPC4Q13310 644 aaKnown RBP eCLIP13.88□□□□□ -0.19
COLCA1-201ENST00000355430 POSTNQ15063 836 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 KRBA2Q6ZNG9 492 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 HEATR3Q7Z4Q2 680 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
COLCA1-201ENST00000355430 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
COLCA1-201ENST00000355430 GTF2IP78347 998 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
COLCA1-201ENST00000355430 HDXQ7Z353 690 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 TAX1BP1Q86VP1 789 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 TTC14Q96N46 770 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 CA8P35219 290 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 PLIN2Q99541 437 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
COLCA1-201ENST00000355430 SYNRGQ9UMZ2 1314 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 DEXIO95424 95 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 VPS16Q9H269 839 aa13.88□□□□□ -0.19
COLCA1-201ENST00000355430 ADKP55263 362 aaKnown RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 RNF187Q5TA31 235 aaPredicted RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 ZNF526Q8TF50 670 aaPredicted RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 SASH1O94885 1247 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 RESTQ13127 1097 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 MLKLQ8NB16 471 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 NEBLO76041 1014 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 LRRC24Q50LG9 513 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 TTF2Q9UNY4 1162 aaKnown RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 NOD1Q9Y239 953 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 NAPAP54920 295 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 ASIC1P78348 528 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
COLCA1-201ENST00000355430 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
COLCA1-201ENST00000355430 ZC3H13Q5T200 1668 aaKnown RBP13.86□□□□□ -0.19
COLCA1-201ENST00000355430 HSF2BPO75031 334 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 KRT83P78385 493 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 VPS72Q15906 364 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 TRMT1LQ7Z2T5 733 aaKnown RBP13.86□□□□□ -0.19
COLCA1-201ENST00000355430 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 BBOX1O75936 387 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 MFSD14BQ5SR56 506 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 TTLL6Q8N841 843 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 PPP1R13BQ96KQ4 1090 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 FAM107BQ9H098 131 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 ZNF532Q9HCE3 1301 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
COLCA1-201ENST00000355430 MAATS1Q7Z4T9 603 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 NAA15Q9BXJ9 866 aaKnown RBP13.86□□□□□ -0.19
COLCA1-201ENST00000355430 SERTAD1Q9UHV2 236 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 RPAP1Q9BWH6 1393 aaPredicted RBP13.86□□□□□ -0.19
COLCA1-201ENST00000355430 KRT86O43790 486 aa13.86□□□□□ -0.19
COLCA1-201ENST00000355430 ZBED4O75132 1171 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 OAS2P29728 719 aaKnown RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 NAPGQ99747 312 aaPredicted RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 CMA1P23946 247 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 DPCR1Q3MIW9 517 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 LONRF3Q496Y0 759 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 CLIC6Q96NY7 704 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 LUC7L2Q9Y383 392 aaKnown RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 MMP10P09238 476 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 RTEL1Q9NZ71 1219 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 ADRA2BP18089 450 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 XDHP47989 1333 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 AGLP35573 1532 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
COLCA1-201ENST00000355430 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
COLCA1-201ENST00000355430 TMCO5BA8MYB1 307 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 TACC1O75410 805 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 NPR1P16066 1061 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
COLCA1-201ENST00000355430 KIF5AQ12840 1032 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 CCDC122Q5T0U0 273 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 DESI2Q9BSY9 194 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 INO80Q9ULG1 1556 aaPredicted RBP13.84□□□□□ -0.19
COLCA1-201ENST00000355430 M0R2C6 588 aa13.84□□□□□ -0.19
COLCA1-201ENST00000355430 PARP1P09874 1014 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms