RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
NPHP1-202ENST00000355301 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.61
NPHP1-202ENST00000355301 SLC12A7Q9Y666 1083 aa11.27□□□□□ -0.61
NPHP1-202ENST00000355301 NID2Q14112 1375 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 ZBTB43O43298 467 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
NPHP1-202ENST00000355301 TSPY3P0CV98 308 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 TSPY8P0CW00 308 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 GJB2P29033 226 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
NPHP1-202ENST00000355301 NBPF9Q3BBW0 867 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 CCDC178Q5BJE1 867 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 IFIT1BQ5T764 474 aaKnown RBP11.26□□□□□ -0.61
NPHP1-202ENST00000355301 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
NPHP1-202ENST00000355301 SMARCC2Q8TAQ2 1214 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 NCOA5Q9HCD5 579 aaKnown RBP11.26□□□□□ -0.61
NPHP1-202ENST00000355301 IL17RBQ9NRM6 502 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 MYH8P13535 1937 aa11.26□□□□□ -0.61
NPHP1-202ENST00000355301 SOCS7O14512 581 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 NMT2O60551 498 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 EGFRP00533 1210 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPHP1-202ENST00000355301 RAB3GAP1Q15042 981 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 RCSD1Q6JBY9 416 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 SYNE3Q6ZMZ3 975 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 DGKHQ86XP1 1220 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 FOXP4Q8IVH2 680 aaPredicted RBP11.25□□□□□ -0.61
NPHP1-202ENST00000355301 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 ANKS1AQ92625 1134 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 CNTNAP1P78357 1384 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 PLIN4Q96Q06 1357 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 SHMT1P34896 483 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 MICU3Q86XE3 530 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 ZSCAN29Q8IWY8 852 aaPredicted RBP11.25□□□□□ -0.61
NPHP1-202ENST00000355301 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 NSUN7Q8NE18 718 aaKnown RBP11.25□□□□□ -0.61
NPHP1-202ENST00000355301 DNAJC18Q9H819 358 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 GPRC5DQ9NZD1 345 aa11.25□□□□□ -0.61
NPHP1-202ENST00000355301 TCP10L2B9ZVM9 353 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
NPHP1-202ENST00000355301 NOVP48745 357 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
NPHP1-202ENST00000355301 PKP1Q13835 747 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 SAMD7Q7Z3H4 446 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
NPHP1-202ENST00000355301 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 VEZTQ9HBM0 779 aa11.24□□□□□ -0.61
NPHP1-202ENST00000355301 GOLGA8AA7E2F4 631 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 H7C1D1 291 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 JAK2O60674 1132 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 SYT1P21579 422 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 TROAPQ12815 778 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 GPR162Q16538 588 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 MYL10Q9BUA6 226 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CPLX1O14810 134 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 DDAH1O94760 285 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 BRD1O95696 1058 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CALM1P0DP23 149 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CALM2P0DP24 149 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CALM3P0DP25 149 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 RXRAP19793 462 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 PDCP20941 246 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CDC27P30260 824 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 ADD1P35611 737 aaKnown RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 TNFAIP1Q13829 316 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 KIF4BQ2VIQ3 1234 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 CCDC17Q96LX7 622 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 PGAP2Q9UHJ9 254 aa11.23□□□□□ -0.61
NPHP1-202ENST00000355301 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
NPHP1-202ENST00000355301 IGKV6D-41A0A0C4DH26 115 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 STX6O43752 255 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 DTNBO60941 627 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 CDKL5O76039 1030 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 AKR1B1P15121 316 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 TNNI2P48788 182 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 NTRK3Q16288 839 aa11.22□□□□□ -0.61
NPHP1-202ENST00000355301 RTN1Q16799 776 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms