RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 EVCP57679 992 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 METTL14Q9HCE5 456 aaKnown RBP12.35□□□□□ -0.43
SND1-201ENST00000354725 VPS37CA5D8V6 355 aaPredicted RBP12.35□□□□□ -0.43
SND1-201ENST00000354725 MYL6BP14649 208 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 SNW1Q13573 536 aaKnown RBP12.35□□□□□ -0.43
SND1-201ENST00000354725 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 LUZP1Q86V48 1076 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
SND1-201ENST00000354725 PHC3Q8NDX5 983 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
SND1-201ENST00000354725 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 PFKFB2O60825 505 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 ANO6Q4KMQ2 910 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 GIGYF2Q6Y7W6 1299 aaKnown RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 ARPC5LQ9BPX5 153 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 NAA16Q6N069 864 aaPredicted RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 ZSCAN25Q6NSZ9 544 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 CCDC186Q7Z3E2 898 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 GIMAP7Q8NHV1 300 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 UBXN6Q9BZV1 441 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 DTNBO60941 627 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 CYP21A2P08686 494 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 CA8P35219 290 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.434e-8■■■□□ 16.2
SND1-201ENST00000354725 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
SND1-201ENST00000354725 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
SND1-201ENST00000354725 PTGS1P23219 599 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.44
SND1-201ENST00000354725 SETDB1Q15047 1291 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 CCDC26Q8TAB7 109 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 EXOC4Q96A65 974 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 CPSF2Q9P2I0 782 aaKnown RBP12.33□□□□□ -0.44
SND1-201ENST00000354725 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
SND1-201ENST00000354725 TBC1D2BQ9UPU7 963 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
SND1-201ENST00000354725 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
SND1-201ENST00000354725 CLCN6P51797 869 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 SCRN1Q12765 414 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 MRFAP1L1Q96HT8 127 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 TNMDQ9H2S6 317 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
SND1-201ENST00000354725 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 CARMIL3Q8ND23 1372 aa12.33□□□□□ -0.44
SND1-201ENST00000354725 JAK2O60674 1132 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 TRAF1Q13077 416 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 NFIXQ14938 502 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 GNL3LQ9NVN8 582 aaKnown RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 MYBL2P10244 700 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 LMAN1P49257 510 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 TRIM73Q86UV7 250 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 CHD4Q14839 1912 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 TAF1P21675 1872 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
SND1-201ENST00000354725 ZRANB2O95218 330 aaKnown RBP eCLIP12.32□□□□□ -0.44
SND1-201ENST00000354725 RFC4P35249 363 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 NEK1Q96PY6 1258 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 GPR108Q9NPR9 543 aa12.32□□□□□ -0.44
SND1-201ENST00000354725 WWC2Q6AWC2 1192 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 LEKR1Q6ZMV7 388 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 TAF4BQ92750 862 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 G3BP2Q9UN86 482 aaKnown RBP12.31□□□□□ -0.44
SND1-201ENST00000354725 OAS2P29728 719 aaKnown RBP12.31□□□□□ -0.44
SND1-201ENST00000354725 ELF1P32519 619 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 PSMD2Q13200 908 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
SND1-201ENST00000354725 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms