RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MECOMQ03112 1051 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 RASGRF1Q13972 1273 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 MFSD14CQ5VZR4 134 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
DDX55-202ENST00000354291 APBA2Q99767 749 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 WDR18Q9BV38 432 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 PRDM5Q9NQX1 630 aaPredicted RBP19.66■□□□□ 0.74
DDX55-202ENST00000354291 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
DDX55-202ENST00000354291 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
DDX55-202ENST00000354291 BADQ92934 168 aa19.65■□□□□ 0.74
DDX55-202ENST00000354291 DDX20Q9UHI6 824 aaKnown RBP19.65■□□□□ 0.74
DDX55-202ENST00000354291 TNFRSF10AO00220 468 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 TIMM10P62072 90 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 SMAD3P84022 425 aaKnown RBP19.64■□□□□ 0.73
DDX55-202ENST00000354291 MAP2K5Q13163 448 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 WDR78Q5VTH9 848 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 LPAR1Q92633 364 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
DDX55-202ENST00000354291 CIAO1O76071 339 aa19.63■□□□□ 0.73
DDX55-202ENST00000354291 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
DDX55-202ENST00000354291 TJAP1Q5JTD0 557 aa19.63■□□□□ 0.73
DDX55-202ENST00000354291 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
DDX55-202ENST00000354291 HERC5Q9UII4 1024 aaKnown RBP19.63■□□□□ 0.73
DDX55-202ENST00000354291 LOC285556D6RIA3 1793 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 DNM1LO00429 736 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
DDX55-202ENST00000354291 LDHCP07864 332 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 IL15P40933 162 aaPredicted RBP19.62■□□□□ 0.73
DDX55-202ENST00000354291 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
DDX55-202ENST00000354291 ZNF384Q8TF68 577 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 FBXO3Q9UK99 471 aa19.62■□□□□ 0.73
DDX55-202ENST00000354291 MSCO60682 206 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 GLRX3O76003 335 aaKnown RBP19.61■□□□□ 0.73
DDX55-202ENST00000354291 ASNSP08243 561 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 JAG1P78504 1218 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 SLC39A5Q6ZMH5 540 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 TEX11Q8IYF3 940 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
DDX55-202ENST00000354291 PI4KBQ9UBF8 816 aa19.61■□□□□ 0.73
DDX55-202ENST00000354291 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
DDX55-202ENST00000354291 CYP2C19P33261 490 aa19.6■□□□□ 0.73
DDX55-202ENST00000354291 GSTO1P78417 241 aa19.6■□□□□ 0.73
DDX55-202ENST00000354291 SHROOM1Q2M3G4 852 aaPredicted RBP19.6■□□□□ 0.73
DDX55-202ENST00000354291 GDF11O95390 407 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 MAP4K4O95819 1239 aaPredicted RBP19.59■□□□□ 0.73
DDX55-202ENST00000354291 CCNA1P78396 465 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 TBC1D9Q6ZT07 1266 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 USP38Q8NB14 1042 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 ARRDC4Q8NCT1 418 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 RAI14Q9P0K7 980 aa19.59■□□□□ 0.73
DDX55-202ENST00000354291 PTPRCP08575 1304 aa19.58■□□□□ 0.73
DDX55-202ENST00000354291 TRIM60Q495X7 471 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 ANO1Q5XXA6 986 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 SH3RF1Q7Z6J0 888 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 TRPV1Q8NER1 839 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 NSUN4Q96CB9 384 aaKnown RBP19.58■□□□□ 0.72
DDX55-202ENST00000354291 EMILIN3Q9NT22 766 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
DDX55-202ENST00000354291 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
DDX55-202ENST00000354291 TMEM265A0A087WTH1 108 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 SLC15A5A6NIM6 579 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 KBTBD13C9JR72 458 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 ZBTB22O15209 634 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 PTPREP23469 700 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 USP17L2Q6R6M4 530 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
DDX55-202ENST00000354291 NPLOC4Q8TAT6 608 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 SH3RF3Q8TEJ3 882 aaPredicted RBP19.57■□□□□ 0.72
DDX55-202ENST00000354291 PPM1EQ8WY54 764 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
DDX55-202ENST00000354291 XAGE2Q96GT9 111 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 IVNS1ABPQ9Y6Y0 642 aa19.57■□□□□ 0.72
DDX55-202ENST00000354291 CNMDO75829 334 aa19.56■□□□□ 0.72
DDX55-202ENST00000354291 UBTFL1P0CB47 393 aaPredicted RBP19.56■□□□□ 0.72
DDX55-202ENST00000354291 ZYXQ15942 572 aaKnown RBP19.56■□□□□ 0.72
DDX55-202ENST00000354291 FERMT2Q96AC1 680 aa19.56■□□□□ 0.72
DDX55-202ENST00000354291 RNPC3Q96LT9 517 aaKnown RBP19.56■□□□□ 0.72
DDX55-202ENST00000354291 NOL10Q9BSC4 688 aaKnown RBP19.56■□□□□ 0.72
DDX55-202ENST00000354291 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
DDX55-202ENST00000354291 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
DDX55-202ENST00000354291 ZNF521Q96K83 1311 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 A0A1B0GUL7 405 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 ADCYAP1R1P41586 468 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
DDX55-202ENST00000354291 PI16Q6UXB8 463 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 FOXP4Q8IVH2 680 aaPredicted RBP19.55■□□□□ 0.72
DDX55-202ENST00000354291 FAM122AQ96E09 287 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 NEUROD6Q96NK8 337 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 HMG20BQ9P0W2 317 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 ZBTB21Q9ULJ3 1066 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
DDX55-202ENST00000354291 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
DDX55-202ENST00000354291 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms