RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 UBAC1Q9BSL1 405 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 CABP5Q9NP86 173 aa19.09■□□□□ 0.65
PDAP1-201ENST00000350498 AATFQ9NY61 560 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDAP1-201ENST00000350498 NEMFO60524 1076 aa19.08■□□□□ 0.65
PDAP1-201ENST00000350498 PRDX5P30044 214 aa19.08■□□□□ 0.65
PDAP1-201ENST00000350498 FBXO38Q6PIJ6 1188 aa19.08■□□□□ 0.65
PDAP1-201ENST00000350498 PPP1R13BQ96KQ4 1090 aa19.08■□□□□ 0.65
PDAP1-201ENST00000350498 C8orf37Q96NL8 207 aa19.08■□□□□ 0.65
PDAP1-201ENST00000350498 ERICH2A1L162 156 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 USP17L12C9JPN9 530 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 USP17L21D6R901 530 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 PPP6R2O75170 966 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 FAM47AQ5JRC9 791 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
PDAP1-201ENST00000350498 BSDC1Q9NW68 430 aaPredicted RBP19.08■□□□□ 0.64
PDAP1-201ENST00000350498 KCNH3Q9ULD8 1083 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 PCDHA5Q9Y5H7 936 aa19.08■□□□□ 0.64
PDAP1-201ENST00000350498 CACNA1SQ13698 1873 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 GNAT2P19087 354 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 KIF18AQ8NI77 898 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 ST7Q9NRC1 585 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 ZNF652Q9Y2D9 606 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 CASP1P29466 404 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 UTP14CQ5TAP6 766 aaKnown RBP19.07■□□□□ 0.64
PDAP1-201ENST00000350498 GPR101Q96P66 508 aaPredicted RBP19.07■□□□□ 0.64
PDAP1-201ENST00000350498 DDX41Q9UJV9 622 aaKnown RBP19.07■□□□□ 0.64
PDAP1-201ENST00000350498 MYH13Q9UKX3 1938 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 RTL9Q8NET4 1388 aa19.07■□□□□ 0.64
PDAP1-201ENST00000350498 MECOMQ03112 1051 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
PDAP1-201ENST00000350498 PKN1Q16512 942 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 CTR9Q6PD62 1173 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 OGFRQ9NZT2 677 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 CGNQ9P2M7 1197 aaKnown RBP19.06■□□□□ 0.64
PDAP1-201ENST00000350498 TIAM2Q8IVF5 1701 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 TMEM232C9JQI7 657 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 FANCCQ00597 558 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 SART3Q15020 963 aaKnown RBP19.06■□□□□ 0.64
PDAP1-201ENST00000350498 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 CASZ1Q86V15 1759 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 CNNM3Q8NE01 707 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
PDAP1-201ENST00000350498 FBXO2Q9UK22 296 aaPredicted RBP19.06■□□□□ 0.64
PDAP1-201ENST00000350498 V9GY48 417 aaPredicted RBP19.06■□□□□ 0.64
PDAP1-201ENST00000350498 POLR2DO15514 142 aaKnown RBP19.05■□□□□ 0.64
PDAP1-201ENST00000350498 SYCP1Q15431 976 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 ERCC6LQ2NKX8 1250 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 CAVIN4Q5BKX8 364 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 SERTAD1Q9UHV2 236 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 STK36Q9NRP7 1315 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 FANCGO15287 622 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 SFPQP23246 707 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDAP1-201ENST00000350498 ZSCAN10Q96SZ4 725 aaPredicted RBP19.05■□□□□ 0.64
PDAP1-201ENST00000350498 FEZ1Q99689 392 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.05■□□□□ 0.64
PDAP1-201ENST00000350498 RREB1Q92766 1687 aa19.05■□□□□ 0.64
PDAP1-201ENST00000350498 GNPATO15228 680 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 UBE4AQ14139 1066 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 KRI1Q8N9T8 703 aaKnown RBP19.04■□□□□ 0.64
PDAP1-201ENST00000350498 ESR2Q92731 530 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 NSUN4Q96CB9 384 aaKnown RBP19.04■□□□□ 0.64
PDAP1-201ENST00000350498 CUTAO60888 179 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 DEXIO95424 95 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 GSDMDP57764 484 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
PDAP1-201ENST00000350498 CLEC4GQ6UXB4 293 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 FANCLQ9NW38 375 aa19.04■□□□□ 0.64
PDAP1-201ENST00000350498 A0A087X0B3 334 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 MDM2Q00987 491 aaPredicted RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 FUT2Q10981 343 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 GRIK5Q16478 980 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 TRMT44Q8IYL2 757 aaKnown RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 ZNF446Q9NWS9 450 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 NBPF5PQ86XG9 351 aaPredicted RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 JMYQ8N9B5 988 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 SMARCC1Q92922 1105 aaPredicted RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 CSRNP2Q9H175 543 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 TMX1Q9H3N1 280 aa19.03■□□□□ 0.64
PDAP1-201ENST00000350498 RNF41Q9H4P4 317 aaPredicted RBP19.03■□□□□ 0.64
PDAP1-201ENST00000350498 A0A1B0GUL6 1792 aa19.02■□□□□ 0.64
PDAP1-201ENST00000350498 COL5A3P25940 1745 aaPredicted RBP19.02■□□□□ 0.64
PDAP1-201ENST00000350498 SLU7O95391 586 aaKnown RBP19.02■□□□□ 0.64
PDAP1-201ENST00000350498 SAFBQ15424 915 aaKnown RBP eCLIP19.02■□□□□ 0.64
PDAP1-201ENST00000350498 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.64
PDAP1-201ENST00000350498 FBXO33Q7Z6M2 555 aa19.02■□□□□ 0.64
PDAP1-201ENST00000350498 NGLY1Q96IV0 654 aa19.02■□□□□ 0.64
PDAP1-201ENST00000350498 EPSTI1Q96J88 318 aa19.02■□□□□ 0.64
PDAP1-201ENST00000350498 BPIFA3Q9BQP9 254 aa19.02■□□□□ 0.64
PDAP1-201ENST00000350498 GTPBP4Q9BZE4 634 aaKnown RBP19.02■□□□□ 0.64
PDAP1-201ENST00000350498 FMR1Q06787 632 aaKnown RBP eCLIP19.02■□□□□ 0.63
PDAP1-201ENST00000350498 FAM177A1Q8N128 213 aaPredicted RBP19.02■□□□□ 0.63
PDAP1-201ENST00000350498 TIGD1Q96MW7 591 aa19.02■□□□□ 0.63
PDAP1-201ENST00000350498 MYH6P13533 1939 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 PTPREP23469 700 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 MED15Q96RN5 788 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 IMPACTQ9P2X3 320 aa19.01■□□□□ 0.63
PDAP1-201ENST00000350498 ANAPC4Q9UJX5 808 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms