RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 A0A1B0GVG6 124 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 DNM1LO00429 736 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 BUB1BO60566 1050 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 SMNDC1O75940 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 SLC8A1P32418 973 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 PLCB4Q15147 1175 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 NAPGQ99747 312 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 NUP58Q9BVL2 599 aa12.01□□□□□ -0.49
CAPN3-203ENST00000349748 CPSF1Q10570 1443 aaKnown RBP12.01□□□□□ -0.49
CAPN3-203ENST00000349748 SPDYE3A6NKU9 549 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 IKBKBO14920 756 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 TUBB4BP68371 445 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 MYL5Q02045 173 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 TTMPQ5BVD1 217 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 SLC30A9Q6PML9 568 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 Q6ZUG5 572 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 SPATS2Q86XZ4 545 aaKnown RBP12□□□□□ -0.49
CAPN3-203ENST00000349748 MAGEC3Q8TD91 643 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 SPAG5Q96R06 1193 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 PSMD1Q99460 953 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 EPAS1Q99814 870 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 BATF3Q9NR55 127 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 PCDHGC5Q9Y5F6 944 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 STRCP1A6NGW2 1772 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
CAPN3-203ENST00000349748 LSP1P33241 339 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 FKBP15Q5T1M5 1219 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 MCM10Q7L590 875 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 CPLX3Q8WVH0 158 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 HOOK2Q96ED9 719 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 SPATA21Q7Z572 469 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 KDM4CQ9H3R0 1056 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 GOPCQ9HD26 462 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 HDAC6Q9UBN7 1215 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 BAIAP2L1Q9UHR4 511 aa12□□□□□ -0.49
CAPN3-203ENST00000349748 EDC4Q6P2E9 1401 aaKnown RBP11.99□□□□□ -0.49
CAPN3-203ENST00000349748 GOLGA6L7A0A1B0GV03 622 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 ABCD1P33897 745 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 APBA1Q02410 837 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 LONRF3Q496Y0 759 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 FILIP1LQ4L180 1135 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 CCDC121Q6ZUS5 278 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 ACRBPQ8NEB7 543 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 L3MBTL1Q9Y468 752 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-203ENST00000349748 CAPZA3Q96KX2 299 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 MMS19Q96T76 1030 aa11.99□□□□□ -0.49
CAPN3-203ENST00000349748 ENC1O14682 589 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 SLC27A2O14975 620 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 SRGAP2O75044 1071 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 LINGO3P0C6S8 592 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 AMPHP49418 695 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 CWF19L1Q69YN2 538 aaKnown RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 RNPC3Q96LT9 517 aaKnown RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 SEC62Q99442 399 aaKnown RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 OSBPL7Q9BZF2 842 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 EPN3Q9H201 632 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 SUDS3Q9H7L9 328 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 AOX1Q06278 1338 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 ATP5JP18859 108 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 RPS6KB1P23443 525 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 SKOR1P84550 965 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 CCDC96Q2M329 555 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 MYLK4Q86YV6 388 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-203ENST00000349748 ZNF570Q96NI8 536 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 NOD2Q9HC29 1040 aa11.98□□□□□ -0.49
CAPN3-203ENST00000349748 FESP07332 822 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 GNAT1P11488 350 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 PAPOLAP51003 745 aaKnown RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 MRPS25P82663 173 aaKnown RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 SPECC1Q5M775 1068 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 PAPOLBQ9NRJ5 636 aaKnown RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 GOLGA8KD6RF30 607 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 SCNN1BP51168 640 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 AMPD2Q01433 879 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 CCNI2Q6ZMN8 369 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-203ENST00000349748 NLRP14Q86W24 1093 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 MYCBPAPQ8TBZ2 947 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 ACSBG1Q96GR2 724 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 BLOC1S6Q9UL45 172 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 CHL1O00533 1208 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 AHCYL1O43865 530 aa11.97□□□□□ -0.49
CAPN3-203ENST00000349748 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms