RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 BMP2P12643 396 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 IDEP14735 1019 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 EZRP15311 586 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 SSFA2P28290 1259 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 IFIT5Q13325 482 aaKnown RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CALML4Q96GE6 196 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CXXC1Q9P0U4 656 aaPredicted RBP6.78□□□□□ -1.32
RFC1-201ENST00000349703 STK26Q9P289 416 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 ARHGEF11O15085 1522 aa6.78□□□□□ -1.32
RFC1-201ENST00000349703 CDK13Q14004 1512 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 TOPBP1Q92547 1522 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 EIF3JO75822 258 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 MAN1A1P33908 653 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 GDF10P55107 478 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 GUCY1A3Q02108 690 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 GDF6Q6KF10 455 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 LRRC69Q6ZNQ3 347 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 DNAJC7Q99615 494 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 PDS5BQ9NTI5 1447 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 TTLL13PA6NNM8 815 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 PPARGP37231 505 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 MLC1Q15049 377 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 RNF214Q8ND24 703 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 SH3TC2Q8TF17 1288 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.77□□□□□ -1.33
RFC1-201ENST00000349703 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ARGLU1Q9NWB6 273 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 CPSF2Q9P2I0 782 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 FAM8A1Q9UBU6 413 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 APPL1Q9UKG1 709 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 CCDC141Q6ZP82 1450 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 TREML1Q86YW5 311 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 C16orf71Q8IYS4 520 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 C17orf53Q8N3J3 647 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 PCDHA4Q9UN74 947 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ABCC2Q92887 1545 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ADGBQ8N7X0 1667 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ERICH4A6NGS2 130 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 SLU7O95391 586 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 ARF3P61204 181 aaPredicted RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 ARF1P84077 181 aaKnown RBP6.77□□□□□ -1.33
RFC1-201ENST00000349703 GSTM4Q03013 218 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 SLC9A9Q8IVB4 645 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 ANAPC4Q9UJX5 808 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 OGDHLQ9ULD0 1010 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 PRAG1Q86YV5 1406 aa6.77□□□□□ -1.33
RFC1-201ENST00000349703 IQGAP2Q13576 1575 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 NPC1L1Q9UHC9 1359 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 PER1O15534 1290 aaPredicted RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 HSPA6P17066 643 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 RAPGEF1Q13905 1077 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 ATF7IPQ6VMQ6 1270 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 TCP11L2Q8N4U5 519 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 LRRN4CLQ8ND94 238 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 DDX17Q92841 729 aaKnown RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 SMARCC1Q92922 1105 aaPredicted RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 UBE2OQ9C0C9 1292 aaKnown RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 KANSL3Q9P2N6 904 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 SAT1P21673 171 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 KPNA1P52294 538 aaPredicted RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 KIAA0753Q2KHM9 967 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 PRICKLE2Q7Z3G6 844 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 EPS8L1Q8TE68 723 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 CUL5Q93034 780 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 API5Q9BZZ5 524 aaKnown RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 SMARCAD1Q9H4L7 1026 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 A6NHS1 94 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 MAFGO15525 162 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 ATP6V1G1O75348 118 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 DPY19L1Q2PZI1 675 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 ODF2LQ9ULJ1 636 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 CSADQ9Y600 493 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 ADGRL2O95490 1459 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 CLASP1Q7Z460 1538 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 DISP3Q9P2K9 1392 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 GRIN3BO60391 1043 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 KRT38O76015 456 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 RXRAP19793 462 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 POLD1P28340 1107 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 PUM3Q15397 648 aaKnown RBP6.76□□□□□ -1.33
RFC1-201ENST00000349703 ZNF662Q6ZS27 426 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 GSTA5Q7RTV2 222 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 CATIPQ7Z7H3 387 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 RUFY2Q8WXA3 655 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 WNT2BQ93097 391 aa6.76□□□□□ -1.33
RFC1-201ENST00000349703 C8orf37Q96NL8 207 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms