RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 COBLO75128 1261 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 CASP1P29466 404 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 SCNN1DP51172 638 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 EVCP57679 992 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 ST5P78524 1137 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 ALX1Q15699 326 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
TRIM4-201ENST00000349062 UIMC1Q96RL1 719 aa16■□□□□ 0.15
TRIM4-201ENST00000349062 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
TRIM4-201ENST00000349062 U2AF2P26368 475 aaKnown RBP eCLIP15.99■□□□□ 0.15
TRIM4-201ENST00000349062 AFMP43652 599 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 CEP57L1Q8IYX8 460 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
TRIM4-201ENST00000349062 CNNM3Q8NE01 707 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 TM4SF1P30408 202 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 LIFRP42702 1097 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
TRIM4-201ENST00000349062 PNPLA7Q6ZV29 1317 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 GRAPQ13588 217 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 NOSTRINQ8IVI9 506 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
TRIM4-201ENST00000349062 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
TRIM4-201ENST00000349062 FMNL1O95466 1100 aaPredicted RBP15.98■□□□□ 0.15
TRIM4-201ENST00000349062 CDC25AP30304 524 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 KLHL10Q6JEL2 608 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 ANO10Q9NW15 660 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 CCDC196A0A1B0GTZ2 297 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 GOLGA6L6A8MZA4 724 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
TRIM4-201ENST00000349062 GYS1P13807 737 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 NLRP5P59047 1200 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 ZNF710Q8N1W2 664 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 PLIN2Q99541 437 aa15.98■□□□□ 0.15
TRIM4-201ENST00000349062 BAZ2AQ9UIF9 1905 aaKnown RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 IFNAR1P17181 557 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 PLCD1P51178 756 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 PDE4BQ07343 736 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 EARS2Q5JPH6 523 aaKnown RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 SHC4Q6S5L8 630 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 CLEC10AQ8IUN9 316 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 ZNF444Q8N0Y2 327 aaPredicted RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 TRMT1Q9NXH9 659 aaKnown RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 APBA3O96018 575 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 SLC39A14Q15043 492 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 LONRF3Q496Y0 759 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 SLC10A5Q5PT55 438 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 RC3H1Q5TC82 1133 aaKnown RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
TRIM4-201ENST00000349062 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
TRIM4-201ENST00000349062 ENGASEQ8NFI3 743 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 C16orf45Q96MC5 204 aaPredicted RBP15.96■□□□□ 0.15
TRIM4-201ENST00000349062 KAT14Q9H8E8 782 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 RIOK3O14730 519 aaKnown RBP15.96■□□□□ 0.15
TRIM4-201ENST00000349062 DEXIO95424 95 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 PIK3AP1Q6ZUJ8 805 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 NBPF11Q86T75 865 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 JMYQ8N9B5 988 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 DHX58Q96C10 678 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 YEATS4O95619 227 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 MMP1P03956 469 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 MCM7P33993 719 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 BTDP43251 543 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 ZNF75DP51815 510 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIM4-201ENST00000349062 AMOTL1Q8IY63 956 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.15
TRIM4-201ENST00000349062 WASF1Q92558 559 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 KCNF1Q9H3M0 494 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 KCNH3Q9ULD8 1083 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 CACNB3P54284 484 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 AXDND1Q5T1B0 1012 aaPredicted RBP15.95■□□□□ 0.14
TRIM4-201ENST00000349062 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
TRIM4-201ENST00000349062 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
TRIM4-201ENST00000349062 TMTC2Q8N394 836 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 MYH2Q9UKX2 1941 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 VWA3AA6NCI4 1184 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 XBP1P17861 261 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 DDR1Q08345 913 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
TRIM4-201ENST00000349062 XDHP47989 1333 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 WNT7AO00755 349 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 ADAMTS3O15072 1205 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 TOB1P50616 345 aaPredicted RBP15.94■□□□□ 0.14
TRIM4-201ENST00000349062 GOLGA8FQ08AF8 430 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 GOLGA8DPQ0D2H9 430 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 TXNRD1Q16881 649 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 HEATR3Q7Z4Q2 680 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms