RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NCOA7Q8NI08 942 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 RIC1Q4ADV7 1423 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 PPFIA4O75335 1185 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 TRIM28Q13263 835 aaKnown RBP21.2■□□□□ 0.98
SCARF1-202ENST00000348987 SLC9C2Q5TAH2 1124 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 RALYLQ86SE5 291 aaKnown RBP21.2■□□□□ 0.98
SCARF1-202ENST00000348987 TBC1D10CQ8IV04 446 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 EFCAB13Q8IY85 973 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 TTLL11Q8NHH1 800 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 SECISBP2LQ93073 1101 aaKnown RBP21.2■□□□□ 0.98
SCARF1-202ENST00000348987 INCENPQ9NQS7 918 aa21.2■□□□□ 0.98
SCARF1-202ENST00000348987 CPLX1O14810 134 aa21.19■□□□□ 0.98
SCARF1-202ENST00000348987 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
SCARF1-202ENST00000348987 MICALL1Q8N3F8 863 aa21.19■□□□□ 0.98
SCARF1-202ENST00000348987 CPLX3Q8WVH0 158 aa21.19■□□□□ 0.98
SCARF1-202ENST00000348987 SLC4A9Q96Q91 983 aa21.19■□□□□ 0.98
SCARF1-202ENST00000348987 TEX13AQ9BXU3 409 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-202ENST00000348987 RNF40O75150 1001 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 IDH1O75874 414 aaKnown RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 CCDC102BQ68D86 513 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 CYB5R4Q7L1T6 521 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 PIH1D3Q9NQM4 214 aaKnown RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 RAI14Q9P0K7 980 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 AKR1B15C9JRZ8 316 aaPredicted RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 ZNF18P17022 549 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 DNAJC21Q5F1R6 531 aaKnown RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 TADA2BQ86TJ2 420 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 MED4Q9NPJ6 270 aa21.18■□□□□ 0.98
SCARF1-202ENST00000348987 SAMSN1Q9NSI8 373 aaKnown RBP21.18■□□□□ 0.98
SCARF1-202ENST00000348987 CTAGE9A4FU28 777 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 UBE2Q2LH0YL09 131 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 SNAP23O00161 211 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 NLRP10Q86W26 655 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 SLC35F6Q8N357 371 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CTAGE15A4D2H0 777 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 ABL1P00519 1130 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CTAGE8P0CG41 777 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 ZNF827Q17R98 1081 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 MMS22LQ6ZRQ5 1243 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CTAGE6Q86UF2 777 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 SUGP1Q8IWZ8 645 aaKnown RBP21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CTAGE4Q8IX94 777 aa21.17■□□□□ 0.98
SCARF1-202ENST00000348987 NOA1Q8NC60 698 aaKnown RBP21.17■□□□□ 0.98
SCARF1-202ENST00000348987 HELBQ8NG08 1087 aaPredicted RBP21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CDC5LQ99459 802 aaKnown RBP21.17■□□□□ 0.98
SCARF1-202ENST00000348987 CPP00450 1065 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 APPP05067 770 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 PHKA1P46020 1223 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 SPECC1Q5M775 1068 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 RESP18Q5W5W9 173 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 GIGYF2Q6Y7W6 1299 aaKnown RBP21.16■□□□□ 0.98
SCARF1-202ENST00000348987 PHKBQ93100 1093 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 GBP3Q9H0R5 595 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 FBXO3Q9UK99 471 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 SYF2O95926 243 aaKnown RBP21.16■□□□□ 0.98
SCARF1-202ENST00000348987 ADD2P35612 726 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 AFAP1L1Q8TED9 768 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 KCNH3Q9ULD8 1083 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 SPEF2Q9C093 1822 aa21.16■□□□□ 0.98
SCARF1-202ENST00000348987 TEX33O43247 280 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 NR1I3Q14994 352 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 PTPAQ15257 358 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 ACBD3Q9H3P7 528 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 A0A087WUV0 522 aaPredicted RBP21.15■□□□□ 0.98
SCARF1-202ENST00000348987 B4E1Z4 1266 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 PPP6R2O75170 966 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 RBL2Q08999 1139 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 VGLL2Q8N8G2 317 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 MYL10Q9BUA6 226 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 MAN1B1Q9UKM7 699 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 WWC3Q9ULE0 1092 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 PAPPAQ13219 1627 aa21.15■□□□□ 0.98
SCARF1-202ENST00000348987 MCTP2Q6DN12 878 aa21.14■□□□□ 0.98
SCARF1-202ENST00000348987 VPS37DQ86XT2 251 aa21.14■□□□□ 0.98
SCARF1-202ENST00000348987 JMYQ8N9B5 988 aa21.14■□□□□ 0.98
SCARF1-202ENST00000348987 PANX2Q96RD6 677 aa21.14■□□□□ 0.98
SCARF1-202ENST00000348987 ZNF532Q9HCE3 1301 aa21.14■□□□□ 0.97
SCARF1-202ENST00000348987 CTSWP56202 376 aa21.14■□□□□ 0.97
SCARF1-202ENST00000348987 MED15Q96RN5 788 aa21.14■□□□□ 0.97
SCARF1-202ENST00000348987 SHANK3Q9BYB0 1731 aa21.14■□□□□ 0.97
SCARF1-202ENST00000348987 TBC1D2BQ9UPU7 963 aa21.14■□□□□ 0.97
SCARF1-202ENST00000348987 TUBB4BP68371 445 aa21.13■□□□□ 0.97
SCARF1-202ENST00000348987 MICU3Q86XE3 530 aa21.13■□□□□ 0.97
SCARF1-202ENST00000348987 RIN2Q8WYP3 895 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-202ENST00000348987 ANGEL1Q9UNK9 670 aaKnown RBP21.13■□□□□ 0.97
SCARF1-202ENST00000348987 IRS4O14654 1257 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-202ENST00000348987 STARD3NLO95772 234 aa21.13■□□□□ 0.97
SCARF1-202ENST00000348987 MMP14P50281 582 aa21.13■□□□□ 0.97
SCARF1-202ENST00000348987 MDM2Q00987 491 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-202ENST00000348987 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.973e-6■■■■■ 34.1
SCARF1-202ENST00000348987 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
SCARF1-202ENST00000348987 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
SCARF1-202ENST00000348987 FAM237AA0A1B0GTK4 181 aa21.12■□□□□ 0.97
SCARF1-202ENST00000348987 PRPF6O94906 941 aaKnown RBP21.12■□□□□ 0.97
SCARF1-202ENST00000348987 TUBB2AQ13885 445 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms