RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 MTMR2Q13614 643 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 SLC9C1Q4G0N8 1177 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 LCORLQ8N3X6 602 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 ZNF333Q96JL9 665 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 EHD4Q9H223 541 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 AS3MTQ9HBK9 375 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 PCDHB15Q9Y5E8 787 aa16.11■□□□□ 0.17
CLCC1-202ENST00000348264 GNRH1P01148 92 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 CHGBP05060 677 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 OSBPP22059 807 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 ADD2P35612 726 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 EVX2Q03828 476 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
CLCC1-202ENST00000348264 WDR18Q9BV38 432 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 CRNKL1Q9BZJ0 848 aaKnown RBP16.1■□□□□ 0.17
CLCC1-202ENST00000348264 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 SERPINB13Q9UIV8 391 aa16.1■□□□□ 0.17
CLCC1-202ENST00000348264 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
CLCC1-202ENST00000348264 PLCD1P51178 756 aa16.09■□□□□ 0.17
CLCC1-202ENST00000348264 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
CLCC1-202ENST00000348264 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
CLCC1-202ENST00000348264 SDR42E1Q8WUS8 393 aa16.09■□□□□ 0.17
CLCC1-202ENST00000348264 ARMT1Q9H993 441 aa16.09■□□□□ 0.17
CLCC1-202ENST00000348264 MBD4O95243 580 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 GH2P01242 217 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 PRMT2P55345 433 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 BACE1P56817 501 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 TSHZ3Q63HK5 1081 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
CLCC1-202ENST00000348264 ECHDC1Q9NTX5 307 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 GINM1Q9NU53 330 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 PNMA3Q9UL41 463 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 MYPNQ86TC9 1320 aa16.08■□□□□ 0.16
CLCC1-202ENST00000348264 SHMT1P34896 483 aa16.07■□□□□ 0.16
CLCC1-202ENST00000348264 FCGRTP55899 365 aa16.07■□□□□ 0.16
CLCC1-202ENST00000348264 PRKCZQ05513 592 aa16.07■□□□□ 0.16
CLCC1-202ENST00000348264 ANKRD13CQ8N6S4 541 aa16.07■□□□□ 0.16
CLCC1-202ENST00000348264 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.164e-7■■■■□ 23.1
CLCC1-202ENST00000348264 ASCC2Q9H1I8 757 aaPredicted RBP16.07■□□□□ 0.16
CLCC1-202ENST00000348264 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
CLCC1-202ENST00000348264 USP17L10C9JJH3 530 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 PRKAB2O43741 272 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 MYCP01106 439 aaPredicted RBP16.06■□□□□ 0.16
CLCC1-202ENST00000348264 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
CLCC1-202ENST00000348264 CYP2D6P10635 497 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 HOXD10P28358 340 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 GABPAQ06546 454 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 FAM110CQ1W6H9 321 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 NBPF11Q86T75 865 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 CRBNQ96SW2 442 aa16.06■□□□□ 0.16
CLCC1-202ENST00000348264 PABPC4Q13310 644 aaKnown RBP eCLIP16.05■□□□□ 0.16
CLCC1-202ENST00000348264 UBE3CQ15386 1083 aa16.05■□□□□ 0.16
CLCC1-202ENST00000348264 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
CLCC1-202ENST00000348264 RAET1EQ8TD07 263 aa16.05■□□□□ 0.16
CLCC1-202ENST00000348264 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
CLCC1-202ENST00000348264 GABRQQ9UN88 632 aa16.05■□□□□ 0.16
CLCC1-202ENST00000348264 PLXNB2O15031 1838 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
CLCC1-202ENST00000348264 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
CLCC1-202ENST00000348264 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
CLCC1-202ENST00000348264 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 ABCB5Q2M3G0 1257 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 OTUD7AQ8TE49 926 aaPredicted RBP16.04■□□□□ 0.16
CLCC1-202ENST00000348264 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
CLCC1-202ENST00000348264 CEP290O15078 2479 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 TNPO2O14787 897 aaKnown RBP16.03■□□□□ 0.16
CLCC1-202ENST00000348264 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
CLCC1-202ENST00000348264 GRK4P32298 578 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 GUCY1A2P33402 732 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 MTFR1Q15390 333 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 ZYXQ15942 572 aaKnown RBP16.03■□□□□ 0.16
CLCC1-202ENST00000348264 DYNLL2Q96FJ2 89 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 FEZ1Q99689 392 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 TMEM106CQ9BVX2 250 aa16.03■□□□□ 0.16
CLCC1-202ENST00000348264 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
CLCC1-202ENST00000348264 CYP2D7A0A087X1C5 515 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 PEX10O60683 326 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 FLT3LGP49771 235 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 KBTBD3Q8NAB2 608 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 ACER1Q8TDN7 264 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 P2RX7Q99572 595 aaKnown RBP16.02■□□□□ 0.16
CLCC1-202ENST00000348264 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.16
CLCC1-202ENST00000348264 HERVK_113P62684 666 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 SEPT2Q15019 361 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 PI4K2BQ8TCG2 481 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 TXNRD2Q9NNW7 524 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 MORF4L1Q9UBU8 362 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
CLCC1-202ENST00000348264 MPHOSPH10O00566 681 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms