RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 ADCY7P51828 1080 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 CYP26C1Q6V0L0 522 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 VPS37BQ9H9H4 285 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 EXOC3O60645 756 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 SF3A3Q12874 501 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 CALCRLQ16602 461 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 CCDC94Q9BW85 323 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 BZW2Q9Y6E2 419 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 GSTA1P08263 222 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 GSTA2P09210 222 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 KRT15P19012 456 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 PPFIA1Q13136 1202 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 ARHGAP44Q17R89 818 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 SLC1A4P43007 532 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNA1C-204ENST00000347598 AK2P54819 239 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 RYBPQ8N488 228 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PLCH2O75038 1416 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PPP4R1Q8TF05 950 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 BTG4Q9NY30 223 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 NSD2O96028 1365 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 TPH2Q8IWU9 490 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 NELFCDQ8IXH7 590 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 KLHL7Q8IXQ5 586 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 AFAP1L1Q8TED9 768 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 SNX29Q8TEQ0 813 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 AS3MTQ9HBK9 375 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 SAT1P21673 171 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 ITGA6P23229 1130 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PPIP5K1Q6PFW1 1433 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 STAM2O75886 525 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 PDE6BP35913 854 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 IDI1Q13907 227 aa13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 NAPGQ99747 312 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-204ENST00000347598 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 DEXIO95424 95 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 TUBB4AP04350 444 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 IFT20Q8IY31 132 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 ARHGAP24Q8N264 748 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 KRT12Q99456 494 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 PFDN6O15212 129 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 IGHDP01880 384 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 CASP2P42575 452 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 TRIM14Q14142 442 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 NLRX1Q86UT6 975 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 PRKAG2Q9UGJ0 569 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 STK25O00506 426 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 ZNF277Q9NRM2 450 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 TESPA1A2RU30 521 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 CEP104O60308 925 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 STMN1P16949 149 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 VSIG1Q86XK7 387 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 HAUS8Q9BT25 410 aa13.18□□□□□ -0.3
CACNA1C-204ENST00000347598 SYNJ2BP-COX16A0A087WUM0 186 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 HERC4Q5GLZ8 1057 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 COX16Q9P0S2 106 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 PLCB1Q9NQ66 1216 aa13.17□□□□□ -0.3
CACNA1C-204ENST00000347598 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms