RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PSMD14O00487 310 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 TCP11L1Q9NUJ3 509 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 BCS1LQ9Y276 419 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 TSPY3P0CV98 308 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 TSPY8P0CW00 308 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 RASA1P20936 1047 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 NTRK3Q16288 839 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 FANCBQ8NB91 859 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 SLC44A5Q8NCS7 719 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 RGS22Q8NE09 1264 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 CHAMP1Q96JM3 812 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 LMBRD1Q9NUN5 540 aa25.04■■□□□ 1.6
TSPAN3-202ENST00000346495 ARFGEF1Q9Y6D6 1849 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 TCHHQ07283 1943 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 NPM3O75607 178 aaKnown RBP25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 DDAH1O94760 285 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 FOXD4L6Q3SYB3 417 aaPredicted RBP25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 CFAP100Q494V2 611 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 FOXD4L3Q6VB84 417 aaPredicted RBP25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 DGKHQ86XP1 1220 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 NUP133Q8WUM0 1156 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 IDI2Q9BXS1 227 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 ZSCAN16Q9H4T2 348 aaPredicted RBP25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 HDAC9Q9UKV0 1011 aa25.03■■□□□ 1.6
TSPAN3-202ENST00000346495 IFNAR1P17181 557 aa25.02■■□□□ 1.6
TSPAN3-202ENST00000346495 ANKS1AQ92625 1134 aa25.02■■□□□ 1.6
TSPAN3-202ENST00000346495 GMLQ99445 158 aa25.02■■□□□ 1.6
TSPAN3-202ENST00000346495 STK36Q9NRP7 1315 aa25.02■■□□□ 1.6
TSPAN3-202ENST00000346495 LTBP3Q9NS15 1303 aa25.02■■□□□ 1.6
TSPAN3-202ENST00000346495 NFKBIEO00221 500 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 NMT2O60551 498 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 PPFIA3O75145 1194 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 PRPF40AO75400 957 aaKnown RBP25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 HLA-DOAP06340 250 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 JDP2Q8WYK2 163 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 PCDHAC2Q9Y5I4 1007 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 MYH8P13535 1937 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 GABPAQ06546 454 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 SSRP1Q08945 709 aaKnown RBP25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 FERMT3Q86UX7 667 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 AGBL3Q8NEM8 1001 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 C8orf76Q96K31 380 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 IL17RBQ9NRM6 502 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 RBM28Q9NW13 759 aaKnown RBP25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 SWAP70Q9UH65 585 aa25.01■■□□□ 1.59
TSPAN3-202ENST00000346495 NFIAQ12857 509 aa25■■□□□ 1.59
TSPAN3-202ENST00000346495 RESTQ13127 1097 aa25■■□□□ 1.59
TSPAN3-202ENST00000346495 RCSD1Q6JBY9 416 aa25■■□□□ 1.59
TSPAN3-202ENST00000346495 OGFOD1Q8N543 542 aa25■■□□□ 1.59
TSPAN3-202ENST00000346495 NEDD1Q8NHV4 660 aa25■■□□□ 1.59
TSPAN3-202ENST00000346495 DHX36Q9H2U1 1008 aaKnown RBP25■■□□□ 1.59
TSPAN3-202ENST00000346495 FMNL1O95466 1100 aaPredicted RBP24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 FOSBP53539 338 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 TROAPQ12815 778 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 TMEM87AQ8NBN3 555 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 WASF1Q92558 559 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 PHKBQ93100 1093 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 KAT14Q9H8E8 782 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 SERPINB13Q9UIV8 391 aa24.99■■□□□ 1.59
TSPAN3-202ENST00000346495 CSPP1Q1MSJ5 1256 aa24.98■■□□□ 1.59
TSPAN3-202ENST00000346495 TRIM22Q8IYM9 498 aa24.98■■□□□ 1.59
TSPAN3-202ENST00000346495 EHD4Q9H223 541 aa24.98■■□□□ 1.59
TSPAN3-202ENST00000346495 TAOK2Q9UL54 1235 aa24.98■■□□□ 1.59
TSPAN3-202ENST00000346495 CNPY2Q9Y2B0 182 aa24.98■■□□□ 1.59
TSPAN3-202ENST00000346495 DNM1Q05193 864 aaKnown RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 CXCL9Q07325 125 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 CIAPIN1Q6FI81 312 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 FBXO18Q8NFZ0 1043 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 NLGN2Q8NFZ4 835 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 ALG1Q9BT22 464 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 SLC26A6Q9BXS9 759 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 TDRD3Q9H7E2 651 aaKnown RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 FAM198AQ9UFP1 575 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 MYH15Q9Y2K3 1946 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 NCLP19338 710 aaKnown RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 KRT85P78386 507 aa24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 CRACR2BQ8N4Y2 399 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 CTCFLQ8NI51 663 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 PRMT6Q96LA8 375 aaPredicted RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 DDX49Q9Y6V7 483 aaKnown RBP24.97■■□□□ 1.59
TSPAN3-202ENST00000346495 ENTPD3O75355 529 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 CACNB3P54284 484 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 GUCY1B3Q02153 619 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 TNIP1Q15025 636 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 DLGAP5Q15398 846 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 KLHL40Q2TBA0 621 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 NBPF11Q86T75 865 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 MAP3K14Q99558 947 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 ZBTB12Q9Y330 459 aaPredicted RBP24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 PLIN4Q96Q06 1357 aa24.96■■□□□ 1.59
TSPAN3-202ENST00000346495 SPDYE2BA6NHP3 402 aa24.95■■□□□ 1.58
TSPAN3-202ENST00000346495 SPDYE6P0CI01 402 aa24.95■■□□□ 1.58
TSPAN3-202ENST00000346495 USP48Q86UV5 1035 aa24.95■■□□□ 1.58
TSPAN3-202ENST00000346495 TMOD2Q9NZR1 351 aa24.95■■□□□ 1.58
TSPAN3-202ENST00000346495 COL2A1P02458 1487 aaPredicted RBP24.95■■□□□ 1.58
TSPAN3-202ENST00000346495 MYH6P13533 1939 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 TCP10Q12799 353 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 ZFPM1Q8IX07 1006 aa24.94■■□□□ 1.58
TSPAN3-202ENST00000346495 PNMA1Q8ND90 353 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms