RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 DDX11Q96FC9 970 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 NAPBQ9H115 298 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 NCOA5Q9HCD5 579 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 TACC3Q9Y6A5 838 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 BAZ2AQ9UIF9 1905 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 ANKRD31Q8N7Z5 1873 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 NEDD4P46934 1319 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 CTDNEP1O95476 244 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 NCLP19338 710 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 PDIA3P30101 505 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 GPSM2P81274 684 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 CYB5R4Q7L1T6 521 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 CDC37L1Q7L3B6 337 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 RGS17Q9UGC6 210 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 BRPF3Q9ULD4 1205 aa10.85□□□□□ -0.67
ATG4A-202ENST00000345734 NSFL1CQ9UNZ2 370 aaKnown RBP10.85□□□□□ -0.67
ATG4A-202ENST00000345734 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 ZMYM6O95789 1325 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 MAGEB6P1A0A0J9YX57 407 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 DYNLL1P63167 89 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 NAA16Q6N069 864 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 NSUN7Q8NE18 718 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 SDR42E1Q8WUS8 393 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 RBM17Q96I25 401 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 CNPY2Q9Y2B0 182 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 LEMD3Q9Y2U8 911 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 GOLGB1Q14789 3259 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 XDHP47989 1333 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 B4E1Z4 1266 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 GNAT2P19087 354 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 TDO2P48775 406 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 TRDNQ13061 729 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 USP48Q86UV5 1035 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
ATG4A-202ENST00000345734 NSUN4Q96CB9 384 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 ZNF274Q96GC6 653 aaPredicted RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
ATG4A-202ENST00000345734 GADD45BO75293 160 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-202ENST00000345734 PDCP20941 246 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 PRDX5P30044 214 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 EVCP57679 992 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 MECOMQ03112 1051 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 HSP90AA2PQ14568 343 aaPredicted RBP10.83□□□□□ -0.68
ATG4A-202ENST00000345734 CAVIN1Q6NZI2 390 aaKnown RBP10.83□□□□□ -0.68
ATG4A-202ENST00000345734 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 PDS5AQ29RF7 1337 aaKnown RBP10.83□□□□□ -0.68
ATG4A-202ENST00000345734 TIAM2Q8IVF5 1701 aa10.83□□□□□ -0.68
ATG4A-202ENST00000345734 KLF18A0A0U1RQI7 1052 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 PTPDC1A2A3K4 754 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 SMIM22K7EJ46 135 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 HOXA10P31260 410 aaPredicted RBP10.82□□□□□ -0.68
ATG4A-202ENST00000345734 PBX2P40425 430 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 DNM1Q05193 864 aaKnown RBP10.82□□□□□ -0.68
ATG4A-202ENST00000345734 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
ATG4A-202ENST00000345734 NACAP1Q9BZK3 213 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 SENP2Q9HC62 589 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 WDR19Q8NEZ3 1342 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 KLRG2A4D1S0 409 aaPredicted RBP10.82□□□□□ -0.68
ATG4A-202ENST00000345734 GOLGA8BA8MQT2 603 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 UFL1O94874 794 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 MORN1Q5T089 497 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 FAM173BQ6P4H8 233 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 BLOC1S3Q6QNY0 202 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 LRCH3Q96II8 777 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 MYH2Q9UKX2 1941 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 NRXN2Q9P2S2 1712 aa10.82□□□□□ -0.68
ATG4A-202ENST00000345734 MAST2Q6P0Q8 1798 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 SH2B2O14492 632 aaPredicted RBP10.81□□□□□ -0.68
ATG4A-202ENST00000345734 FIBPO43427 364 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 BBOX1O75936 387 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
ATG4A-202ENST00000345734 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 GAS2L3Q86XJ1 694 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 NLGN1Q8N2Q7 840 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 FAM184AQ8NB25 1140 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 ATP6V1DQ9Y5K8 247 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 SALL1Q9NSC2 1324 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 GRIK5Q16478 980 aa10.81□□□□□ -0.68
ATG4A-202ENST00000345734 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
ATG4A-202ENST00000345734 LHX8Q68G74 356 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms