RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 CCDC43Q96MW1 224 aaKnown RBP17.52■□□□□ 0.4
PTPRU-201ENST00000345512 ZNF609O15014 1411 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 PLCD1P51178 756 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 CTSWP56202 376 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 ST3GAL1Q11201 340 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 BRD3Q15059 726 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 MCM9Q9NXL9 1143 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
PTPRU-201ENST00000345512 TSPY3P0CV98 308 aa17.52■□□□□ 0.39
PTPRU-201ENST00000345512 TSPY8P0CW00 308 aa17.52■□□□□ 0.39
PTPRU-201ENST00000345512 FAM107BQ9H098 131 aa17.52■□□□□ 0.39
PTPRU-201ENST00000345512 SAMSN1Q9NSI8 373 aaKnown RBP17.52■□□□□ 0.39
PTPRU-201ENST00000345512 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.39
PTPRU-201ENST00000345512 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 NR5A1Q13285 461 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 TRIM14Q14142 442 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 ARMCX5Q6P1M9 558 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 RABGGTAQ92696 567 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 DNAJC21Q5F1R6 531 aaKnown RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 MAN1B1Q9UKM7 699 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 CEP170BQ9Y4F5 1589 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 COBLO75128 1261 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 TMEM232C9JQI7 657 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
PTPRU-201ENST00000345512 ADD2P35612 726 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 GNAQP50148 359 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 NELFBQ8WX92 580 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
PTPRU-201ENST00000345512 PTPRUQ92729 1446 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 HSF2BPO75031 334 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 PDE8BO95263 885 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 NAPAP54920 295 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 GDAP1L1Q96MZ0 367 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 MORC2Q9Y6X9 1032 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-201ENST00000345512 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 BCCIPQ9P287 314 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPRU-201ENST00000345512 CYP27B1O15528 508 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 RNF187Q5TA31 235 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-201ENST00000345512 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-201ENST00000345512 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-201ENST00000345512 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 ATG3Q9NT62 314 aa17.5■□□□□ 0.39
PTPRU-201ENST00000345512 CASP14P31944 242 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
PTPRU-201ENST00000345512 PPARAQ07869 468 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 SDR42E1Q8WUS8 393 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 MAATS1Q7Z4T9 603 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 TNKSO95271 1327 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 CSGALNACT2Q8N6G5 542 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 BICDL2A1A5D9 508 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 BAG3O95817 575 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 PARD6BQ9BYG5 372 aa17.49■□□□□ 0.39
PTPRU-201ENST00000345512 TMCO5BA8MYB1 307 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 BPIFA3Q9BQP9 254 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 ENOX1Q8TC92 643 aaKnown RBP17.48■□□□□ 0.39
PTPRU-201ENST00000345512 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
PTPRU-201ENST00000345512 CDC23Q9UJX2 597 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 RFX7Q2KHR2 1363 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 ARID5AQ03989 594 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 SRGAP1Q7Z6B7 1085 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 GPIHBP1Q8IV16 184 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 JAKMIP2Q96AA8 810 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
PTPRU-201ENST00000345512 NOC4LQ9BVI4 516 aaKnown RBP17.48■□□□□ 0.39
PTPRU-201ENST00000345512 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 SOWAHDA6NJG2 315 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 ZPR1O75312 459 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 ERCC5P28715 1186 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-201ENST00000345512 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-201ENST00000345512 BCAMP50895 628 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 RBL2Q08999 1139 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 RABL6Q3YEC7 729 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-201ENST00000345512 MB21D2Q8IYB1 491 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-201ENST00000345512 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 EPC1Q9H2F5 836 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-201ENST00000345512 PCDHB6Q9Y5E3 794 aa17.47■□□□□ 0.39
PTPRU-201ENST00000345512 MPHOSPH10O00566 681 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms