RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 SMYD4Q8IYR2 804 aaPredicted RBP21.91■■□□□ 1.1
LYSMD4-202ENST00000344791 SMARCE1Q969G3 411 aa21.91■■□□□ 1.1
LYSMD4-202ENST00000344791 CGNQ9P2M7 1197 aaKnown RBP21.91■■□□□ 1.1
LYSMD4-202ENST00000344791 GNAT2P19087 354 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 FBXO38Q6PIJ6 1188 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 STK36Q9NRP7 1315 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 PTPREP23469 700 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 ENAHQ8N8S7 591 aaPredicted RBP21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 ESR2Q92731 530 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 MTMR7Q9Y216 660 aa21.9■■□□□ 1.1
LYSMD4-202ENST00000344791 CBFA2T2O43439 604 aa21.89■■□□□ 1.1
LYSMD4-202ENST00000344791 KLRK1P26718 216 aa21.89■■□□□ 1.1
LYSMD4-202ENST00000344791 RNF41Q9H4P4 317 aaPredicted RBP21.89■■□□□ 1.1
LYSMD4-202ENST00000344791 CCDC196A0A1B0GTZ2 297 aa21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 MDM2Q00987 491 aaPredicted RBP21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 IFIT1BQ5T764 474 aaKnown RBP21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 CREBRFQ8IUR6 639 aa21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 VSTM4Q8IW00 320 aa21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 DDX60Q8IY21 1712 aaKnown RBP21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 ZNF174Q15697 407 aa21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 FAM47AQ5JRC9 791 aa21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 FOXP1Q9H334 677 aaPredicted RBP21.89■■□□□ 1.09
LYSMD4-202ENST00000344791 TFCP2L1Q9NZI6 479 aa21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 HOOK1Q9UJC3 728 aaKnown RBP21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 PNPLA7Q6ZV29 1317 aa21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 A0A087X0B3 334 aa21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 CPLX3Q8WVH0 158 aa21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 ERO1AQ96HE7 468 aa21.88■■□□□ 1.09
LYSMD4-202ENST00000344791 COL4A1P02462 1669 aa21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 URI1O94763 535 aaPredicted RBP21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 MARCH10Q8NA82 808 aaPredicted RBP21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 DESI2Q9BSY9 194 aa21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 ECM29Q5VYK3 1845 aa21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 ZSCAN10Q96SZ4 725 aaPredicted RBP21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 AATFQ9NY61 560 aaKnown RBP eCLIP21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 DISP2A7MBM2 1401 aa21.87■■□□□ 1.09
LYSMD4-202ENST00000344791 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 USP17L21D6R901 530 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 PARP10Q53GL7 1025 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 CELF1Q92879 486 aaKnown RBP21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 PRDM4Q9UKN5 801 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 FAM237AA0A1B0GTK4 181 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 PSDA5PKW4 1024 aaPredicted RBP21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 MED15Q96RN5 788 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 ANKRD36CQ5JPF3 1778 aa21.86■■□□□ 1.09
LYSMD4-202ENST00000344791 FANCGO15287 622 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 TMTC2Q8N394 836 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 VWA3AA6NCI4 1184 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 TRIM75PA6NK02 468 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 SYCP1Q15431 976 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 SEC23AQ15436 765 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 CATIPQ7Z7H3 387 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 VEGFAP15692 232 aaPredicted RBP21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 PKN1Q16512 942 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 CAVIN4Q5BKX8 364 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 ZNF384Q8TF68 577 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 EPC1Q9H2F5 836 aa21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 GNL3LQ9NVN8 582 aaKnown RBP21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 SRPRBQ9Y5M8 271 aaKnown RBP21.85■■□□□ 1.09
LYSMD4-202ENST00000344791 SLC51AQ86UW1 340 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 ZNF397Q8NF99 534 aaPredicted RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 SYMPKQ92797 1274 aaKnown RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 AK7Q96M32 723 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 RIOK1Q9BRS2 568 aaKnown RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 TAF1P21675 1872 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 KIF2AO00139 706 aaPredicted RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 ACTN4O43707 911 aaKnown RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 CYP2D6P10635 497 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 ETF1P62495 437 aaKnown RBP21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 TOGARAM2Q6ZUX3 1019 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 OGFRQ9NZT2 677 aa21.84■■□□□ 1.09
LYSMD4-202ENST00000344791 KRT2P35908 639 aa21.83■■□□□ 1.09
LYSMD4-202ENST00000344791 IQCA1Q86XH1 822 aa21.83■■□□□ 1.09
LYSMD4-202ENST00000344791 BAG1Q99933 345 aaPredicted RBP21.83■■□□□ 1.09
LYSMD4-202ENST00000344791 BLZF1Q9H2G9 400 aa21.83■■□□□ 1.09
LYSMD4-202ENST00000344791 CHD4Q14839 1912 aa21.83■■□□□ 1.09
LYSMD4-202ENST00000344791 XBP1P17861 261 aa21.83■■□□□ 1.08
LYSMD4-202ENST00000344791 KARSQ15046 597 aaKnown RBP21.83■■□□□ 1.08
LYSMD4-202ENST00000344791 COL1A1P02452 1464 aaPredicted RBP21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 TEX33O43247 280 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 CDC25AP30304 524 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 MTF1Q14872 753 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 FEZ1Q99689 392 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 ST7Q9NRC1 585 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 DDX41Q9UJV9 622 aaKnown RBP21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 CEP131Q9UPN4 1083 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 ADAMTS3O15072 1205 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 DMTNQ08495 405 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 MORC3Q14149 939 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 ARHGAP29Q52LW3 1261 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 FAM84BQ96KN1 310 aaPredicted RBP21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 RNF26Q9BY78 433 aaPredicted RBP21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 MINPP1Q9UNW1 487 aa21.82■■□□□ 1.08
LYSMD4-202ENST00000344791 PRDX5P30044 214 aa21.81■■□□□ 1.08
LYSMD4-202ENST00000344791 ZBTB9Q96C00 473 aa21.81■■□□□ 1.08
LYSMD4-202ENST00000344791 PPP2R2CQ9Y2T4 447 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms