RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 GDF11O95390 407 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
CD55-202ENST00000343420 RRP1P56182 461 aaKnown RBP20.48■□□□□ 0.87
CD55-202ENST00000343420 JAG1P78504 1218 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 PABPC4Q13310 644 aaKnown RBP eCLIP20.48■□□□□ 0.874e-9■■■■□ 23.2
CD55-202ENST00000343420 SMCR8Q8TEV9 937 aaPredicted RBP20.48■□□□□ 0.87
CD55-202ENST00000343420 ZNF333Q96JL9 665 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.87
CD55-202ENST00000343420 SRRDQ9UH36 339 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 ZBTB21Q9ULJ3 1066 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
CD55-202ENST00000343420 ADD2P35612 726 aa20.47■□□□□ 0.87
CD55-202ENST00000343420 FCGRTP55899 365 aa20.47■□□□□ 0.87
CD55-202ENST00000343420 BACE1P56817 501 aa20.47■□□□□ 0.87
CD55-202ENST00000343420 TATDN1Q6P1N9 297 aa20.47■□□□□ 0.87
CD55-202ENST00000343420 C19orf81C9J6K1 198 aa20.46■□□□□ 0.87
CD55-202ENST00000343420 OSBPP22059 807 aa20.46■□□□□ 0.87
CD55-202ENST00000343420 SHROOM1Q2M3G4 852 aaPredicted RBP20.46■□□□□ 0.87
CD55-202ENST00000343420 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
CD55-202ENST00000343420 USP17L10C9JJH3 530 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
CD55-202ENST00000343420 PLCD1P51178 756 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 MTMR2Q13614 643 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 ECHDC1Q9NTX5 307 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 TMOD4Q9NZQ9 345 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 PCDHB15Q9Y5E8 787 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 BRCA2P51587 3418 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 MYPNQ86TC9 1320 aa20.45■□□□□ 0.86
CD55-202ENST00000343420 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 GH2P01242 217 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 UBE3CQ15386 1083 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 CERKLQ49MI3 558 aaPredicted RBP20.44■□□□□ 0.86
CD55-202ENST00000343420 RAET1EQ8TD07 263 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 SDR42E1Q8WUS8 393 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
CD55-202ENST00000343420 TMEM106CQ9BVX2 250 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 MCM9Q9NXL9 1143 aa20.44■□□□□ 0.86
CD55-202ENST00000343420 BAZ2AQ9UIF9 1905 aaKnown RBP20.44■□□□□ 0.86
CD55-202ENST00000343420 MYH8P13535 1937 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 GCLCP48506 637 aaPredicted RBP20.43■□□□□ 0.86
CD55-202ENST00000343420 FAM110CQ1W6H9 321 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 SLFNL1Q499Z3 407 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 ANKRD13CQ8N6S4 541 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 SH3TC2Q8TF17 1288 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 ASCC2Q9H1I8 757 aaPredicted RBP20.43■□□□□ 0.86
CD55-202ENST00000343420 ARMT1Q9H993 441 aa20.43■□□□□ 0.86
CD55-202ENST00000343420 DCP1AQ9NPI6 582 aaPredicted RBP20.43■□□□□ 0.86
CD55-202ENST00000343420 TNRC18O15417 2968 aaPredicted RBP20.43■□□□□ 0.86
CD55-202ENST00000343420 MBD4O95243 580 aa20.42■□□□□ 0.86
CD55-202ENST00000343420 HOXA7P31268 230 aaPredicted RBP20.42■□□□□ 0.86
CD55-202ENST00000343420 SHMT1P34896 483 aa20.42■□□□□ 0.86
CD55-202ENST00000343420 GABPAQ06546 454 aa20.42■□□□□ 0.86
CD55-202ENST00000343420 PRKCZQ05513 592 aa20.41■□□□□ 0.86
CD55-202ENST00000343420 ABCB5Q2M3G0 1257 aa20.41■□□□□ 0.86
CD55-202ENST00000343420 CABP5Q9NP86 173 aa20.41■□□□□ 0.86
CD55-202ENST00000343420 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
CD55-202ENST00000343420 CHGBP05060 677 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 GRK4P32298 578 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 IRX3P78415 501 aaPredicted RBP20.4■□□□□ 0.86
CD55-202ENST00000343420 RAB3GAP1Q15042 981 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 USP17L2Q6R6M4 530 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 TAOK2Q9UL54 1235 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 GABRQQ9UN88 632 aa20.4■□□□□ 0.86
CD55-202ENST00000343420 TNPO2O14787 897 aaKnown RBP20.39■□□□□ 0.85
CD55-202ENST00000343420 PRKAB2O43741 272 aa20.39■□□□□ 0.85
CD55-202ENST00000343420 EN2P19622 333 aaPredicted RBP20.39■□□□□ 0.85
CD55-202ENST00000343420 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
CD55-202ENST00000343420 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.85
CD55-202ENST00000343420 MYCP01106 439 aaPredicted RBP20.38■□□□□ 0.85
CD55-202ENST00000343420 CYP2D6P10635 497 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 USP14P54578 494 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 EVX2Q03828 476 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 KBTBD3Q8NAB2 608 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 SLAIN1Q8ND83 568 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 COA7Q96BR5 231 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 P2RX7Q99572 595 aaKnown RBP20.38■□□□□ 0.85
CD55-202ENST00000343420 PUS7LQ9H0K6 701 aaKnown RBP20.38■□□□□ 0.85
CD55-202ENST00000343420 SWAP70Q9UH65 585 aa20.38■□□□□ 0.85
CD55-202ENST00000343420 TTC41PQ6P2S7 1318 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 FLT3LGP49771 235 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 TSHZ3Q63HK5 1081 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 DDRGK1Q96HY6 314 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 FEZ1Q99689 392 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 MORF4L1Q9UBU8 362 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 SLC4A4Q9Y6R1 1079 aa20.37■□□□□ 0.85
CD55-202ENST00000343420 GUCY1A2P33402 732 aa20.36■□□□□ 0.85
CD55-202ENST00000343420 HERVK_113P62684 666 aa20.36■□□□□ 0.85
CD55-202ENST00000343420 IRF5Q13568 498 aa20.36■□□□□ 0.85
CD55-202ENST00000343420 AMOTL1Q8IY63 956 aa20.36■□□□□ 0.85
CD55-202ENST00000343420 GTF3C2Q8WUA4 911 aaPredicted RBP20.36■□□□□ 0.85
CD55-202ENST00000343420 KIAA1683Q9H0B3 1180 aa20.36■□□□□ 0.85
CD55-202ENST00000343420 ERC2O15083 957 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 ADCY3O60266 1144 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 UBXN2AP68543 259 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 SEPT2Q15019 361 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 MTFR1Q15390 333 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 ZYXQ15942 572 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms