RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 TPX2Q9ULW0 747 aaKnown RBP13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 KIF14Q15058 1648 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 DCUN1D2Q6PH85 259 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 G2E3Q7L622 706 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 DEXIO95424 95 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 KRT19P08727 400 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 GNGT1P63211 74 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 PAK2Q13177 524 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 TTC38Q5R3I4 469 aa13.5□□□□□ -0.25
SEMA6A-202ENST00000343348 ARHGAP42A6NI28 874 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 PEX19P40855 299 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 ARHGAP25P42331 645 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 KLHL30Q0D2K2 578 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 TAB3Q8N5C8 712 aaPredicted RBP13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 BUB1O43683 1085 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 CFAP221Q4G0U5 840 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 RALGAPBQ86X10 1494 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 VPS41P49754 854 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 SMTNP53814 917 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 CCDC89Q8N998 374 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 VCXQ9H320 206 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 STRN3Q13033 797 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 MRPL44Q9H9J2 332 aaKnown RBP13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 ABCB4P21439 1286 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 CMTR1Q8N1G2 835 aaKnown RBP13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 PPIP5K1Q6PFW1 1433 aa13.49□□□□□ -0.25
SEMA6A-202ENST00000343348 MAP2K2P36507 400 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 AATFQ9NY61 560 aaKnown RBP eCLIP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 ARHGEF35A5YM69 484 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 GCKP35557 465 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 CUL4BQ13620 913 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 CCDC117Q8IWD4 279 aaPredicted RBP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 MAP7Q14244 749 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 DIS3L2Q8IYB7 885 aaKnown RBP13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 IMPACTQ9P2X3 320 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 CUTAO60888 179 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 LIG3P49916 1009 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 NUP58Q9BVL2 599 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 SORBS3O60504 671 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 STX2P32856 288 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 PHACTR3Q96KR7 559 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
SEMA6A-202ENST00000343348 RGS16O15492 202 aaPredicted RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 CTNNA1P35221 906 aaKnown RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 CTAGE3PQ8IX95 158 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 IFIH1Q9BYX4 1025 aaKnown RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 RAD50Q92878 1312 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 CEP128Q6ZU80 1094 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 TMTC1Q8IUR5 882 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 LSM14BQ9BX40 385 aaKnown RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 COBLO75128 1261 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 SLC8A3P57103 927 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 GABPB1Q06547 395 aaPredicted RBP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 AFAP1L2Q8N4X5 818 aa13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEMA6A-202ENST00000343348 CALCRLQ16602 461 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 KCNK3O14649 394 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 MRPL12P52815 198 aaKnown RBP13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 TAF5LO75529 589 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 PLCG2P16885 1265 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 PRR16Q569H4 304 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
SEMA6A-202ENST00000343348 EFCC1Q9HA90 598 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms