RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MCM3P25205 808 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TADA2BQ86TJ2 420 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 SEC31BQ9NQW1 1179 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 HPCAL4Q9UM19 191 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 SYNRGQ9UMZ2 1314 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 POLR2DO15514 142 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TFRCP02786 760 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 USP14P54578 494 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 ERVK-24P63145 666 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 GRIN1Q05586 938 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TRIM29Q14134 588 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 DNAJC21Q5F1R6 531 aaKnown RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 CYB5R4Q7L1T6 521 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TRAPPC11Q7Z392 1133 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 SH3RF1Q7Z6J0 888 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TMEM87BQ96K49 555 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 MYO6Q9UM54 1294 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 TIAM2Q8IVF5 1701 aa10.97□□□□□ -0.65
HOXA1-201ENST00000343060 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.65
HOXA1-201ENST00000343060 MAP9Q49MG5 647 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 MMS22LQ6ZRQ5 1243 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 TBC1D10CQ8IV04 446 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 PHKBQ93100 1093 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 PUS7LQ9H0K6 701 aaKnown RBP10.96□□□□□ -0.65
HOXA1-201ENST00000343060 SRPRBQ9Y5M8 271 aaKnown RBP10.96□□□□□ -0.65
HOXA1-201ENST00000343060 CDHR2Q9BYE9 1310 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 MYH8P13535 1937 aa10.96□□□□□ -0.65
HOXA1-201ENST00000343060 GPAA1O43292 621 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.66
HOXA1-201ENST00000343060 MMP1P03956 469 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 CASP14P31944 242 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.66
HOXA1-201ENST00000343060 TRIM14Q14142 442 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 WASHC4Q2M389 1173 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.66
HOXA1-201ENST00000343060 FBXO3Q9UK99 471 aa10.96□□□□□ -0.66
HOXA1-201ENST00000343060 PSMD14O00487 310 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 ZBTB43O43298 467 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 SPECC1Q5M775 1068 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 CYP26C1Q6V0L0 522 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 GRAMD1CQ8IYS0 662 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 WASF1Q92558 559 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 ABHD10Q9NUJ1 306 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 AKAP11Q9UKA4 1901 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 ABL1P00519 1130 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 GCP02774 474 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
HOXA1-201ENST00000343060 FILIP1LQ4L180 1135 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 MCTP2Q6DN12 878 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 COG1Q8WTW3 980 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 RPGRIP1Q96KN7 1286 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 CEP89Q96ST8 783 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 MYCBPQ99417 103 aaPredicted RBP10.95□□□□□ -0.66
HOXA1-201ENST00000343060 LIMA1Q9UHB6 759 aaKnown RBP10.95□□□□□ -0.66
HOXA1-201ENST00000343060 DENND2AQ9ULE3 1009 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
HOXA1-201ENST00000343060 TRPM3Q9HCF6 1732 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 COL22A1Q8NFW1 1626 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 LRRC10BA6NIK2 292 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 PHACTR2O75167 634 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 IFNAR1P17181 557 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 ZNF662Q6ZS27 426 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 AATFQ9NY61 560 aaKnown RBP eCLIP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 PHKG2P15735 406 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 LIFRP42702 1097 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 FKBP4Q02790 459 aaKnown RBP eCLIP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 SF3B2Q13435 895 aaKnown RBP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 NCAPH2Q6IBW4 605 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 MICU3Q86XE3 530 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 CWC25Q9NXE8 425 aaPredicted RBP10.94□□□□□ -0.66
HOXA1-201ENST00000343060 CHD4Q14839 1912 aa10.94□□□□□ -0.66
HOXA1-201ENST00000343060 ATXN2Q99700 1313 aaKnown RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 BTBD18B2RXH4 712 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 RXRAP19793 462 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 ADORA1P30542 326 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 SCARF1Q14162 830 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 PAPD7Q5XG87 772 aaKnown RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 DIS3L2Q8IYB7 885 aaKnown RBP10.93□□□□□ -0.66
HOXA1-201ENST00000343060 ZBTB9Q96C00 473 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 GSDMAQ96QA5 445 aa10.93□□□□□ -0.66
HOXA1-201ENST00000343060 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms