RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 ATP2C1P98194 919 aaPredicted RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 SH3GLB2Q9NR46 395 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 SF3A1Q15459 793 aaKnown RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 FSIP1Q8NA03 581 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 DPF2Q92785 391 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 C8orf76Q96K31 380 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 INCENPQ9NQS7 918 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 ZNF446Q9NWS9 450 aa9.38□□□□□ -0.91
CFAP54-201ENST00000342887 ORC3Q9UBD5 711 aaPredicted RBP9.38□□□□□ -0.91
CFAP54-201ENST00000342887 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 GSDMDP57764 484 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 TSC1Q92574 1164 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 GAKO14976 1311 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 WTIPA6NIX2 430 aaPredicted RBP9.37□□□□□ -0.91
CFAP54-201ENST00000342887 PRKAB2O43741 272 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 PPARAQ07869 468 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 METTL24Q5JXM2 366 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 TMTC3Q6ZXV5 915 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 CDKL5O76039 1030 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 DEXIO95424 95 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 ERCC5P28715 1186 aaPredicted RBP9.37□□□□□ -0.91
CFAP54-201ENST00000342887 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.91
CFAP54-201ENST00000342887 EHHADHQ08426 723 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 ANP32BQ92688 251 aaKnown RBP9.37□□□□□ -0.91
CFAP54-201ENST00000342887 PPP1R13BQ96KQ4 1090 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 TTYH3Q9C0H2 523 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
CFAP54-201ENST00000342887 A0A1B0GVL5 298 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 VWA3AA6NCI4 1184 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 B4E1Z4 1266 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 RSRC2Q7L4I2 434 aaKnown RBP9.36□□□□□ -0.91
CFAP54-201ENST00000342887 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 DDX41Q9UJV9 622 aaKnown RBP9.36□□□□□ -0.91
CFAP54-201ENST00000342887 XDHP47989 1333 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 METAP2P50579 478 aaKnown RBP eCLIP9.36□□□□□ -0.91
CFAP54-201ENST00000342887 ZC3H3Q8IXZ2 948 aaKnown RBP9.36□□□□□ -0.91
CFAP54-201ENST00000342887 NEUROD6Q96NK8 337 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 CLIP2Q9UDT6 1046 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 SNHG28P0DPA3 235 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 IL1R1P14778 569 aa9.36□□□□□ -0.91
CFAP54-201ENST00000342887 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
CFAP54-201ENST00000342887 KLRC4O43908 158 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 MBD4O95243 580 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 ADAMTS2O95450 1211 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
CFAP54-201ENST00000342887 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 EVX2Q03828 476 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 ECM1Q16610 540 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 NAALADL2Q58DX5 795 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 FANCBQ8NB91 859 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 CCDC150Q8NCX0 1101 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
CFAP54-201ENST00000342887 BCAMP50895 628 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 FAM193AP78312 1265 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 CCDC152Q4G0S7 254 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 EP400Q96L91 3159 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 ZBTB43O43298 467 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
CFAP54-201ENST00000342887 MYO3BQ8WXR4 1341 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 RASSF10A6NK89 507 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 CBX1P83916 185 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 FKBP4Q02790 459 aaKnown RBP eCLIP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 CTDSPL2Q05D32 466 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ZNF572Q7Z3I7 529 aaPredicted RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 IRF2BP1Q8IU81 584 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 MAGEB6Q8N7X4 407 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ZNF507Q8TCN5 953 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 LIMA1Q9UHB6 759 aaKnown RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 GOLGA6L6A8MZA4 724 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 FOXN1O15353 648 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 RPS6KA4O75676 772 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ERFEQ4G0M1 354 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 CRYGNQ8WXF5 182 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 ADD3Q9UEY8 706 aaKnown RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 TRMT112Q9UI30 125 aaKnown RBP9.34□□□□□ -0.91
CFAP54-201ENST00000342887 PCDHB6Q9Y5E3 794 aa9.34□□□□□ -0.91
CFAP54-201ENST00000342887 A0A087WWV3 80 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms