RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PA2G4Q9UQ80 394 aaKnown RBP20.87■□□□□ 0.93
SMPD1-201ENST00000342245 PI4KAP2A4QPH2 592 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 APBA1Q02410 837 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 AP1ARQ63HQ0 302 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 PI4KAP1Q8N8J0 262 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 EHD4Q9H223 541 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 SLC40A1Q9NP59 571 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.86■□□□□ 0.93
SMPD1-201ENST00000342245 SPATS2LQ9NUQ6 558 aaKnown RBP20.86■□□□□ 0.93
SMPD1-201ENST00000342245 BMP6P22004 513 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 PLCD1P51178 756 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 PARP9Q8IXQ6 854 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 CCDC13Q8IYE1 715 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 KCNH3Q9ULD8 1083 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
SMPD1-201ENST00000342245 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 A0A0U1RQJ8 604 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 CDC27P30260 824 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 MDM2Q00987 491 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 MORC3Q14149 939 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 KIAA1328Q86T90 577 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 ATRIPQ8WXE1 791 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 HAUS4Q9H6D7 363 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 RIMS1Q86UR5 1692 aaKnown RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 MARCKSP29966 332 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 LONRF3Q496Y0 759 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 TTC19Q6DKK2 380 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 KANK3Q6NY19 840 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 MAB21L3Q8N8X9 362 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 C3orf20Q8ND61 904 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 ZNF483Q8TF39 744 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-201ENST00000342245 TATDN2Q93075 761 aa20.85■□□□□ 0.93
SMPD1-201ENST00000342245 ACEP12821 1306 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 ZNF609O15014 1411 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 FMR1Q06787 632 aaKnown RBP eCLIP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 KDM7AQ6ZMT4 941 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 ACRBPQ8NEB7 543 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 NBPF3Q9H094 633 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 ETAA1Q9NY74 926 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 DDX20Q9UHI6 824 aaKnown RBP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 ZMYM6O95789 1325 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 HSF2BPO75031 334 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 TFRCP02786 760 aaKnown RBP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 SARSP49591 514 aaKnown RBP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 POSTNQ15063 836 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 RNF187Q5TA31 235 aaPredicted RBP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 NAA35Q5VZE5 725 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 TMED8Q6PL24 325 aaPredicted RBP20.84■□□□□ 0.93
SMPD1-201ENST00000342245 MMS19Q96T76 1030 aa20.84■□□□□ 0.93
SMPD1-201ENST00000342245 ZNF662Q6ZS27 426 aa20.83■□□□□ 0.93
SMPD1-201ENST00000342245 ITFG2Q969R8 447 aa20.83■□□□□ 0.93
SMPD1-201ENST00000342245 RSRC1Q96IZ7 334 aaKnown RBP20.83■□□□□ 0.93
SMPD1-201ENST00000342245 ADD3Q9UEY8 706 aaKnown RBP20.83■□□□□ 0.93
SMPD1-201ENST00000342245 IGSF1Q8N6C5 1336 aa20.83■□□□□ 0.93
SMPD1-201ENST00000342245 LTKP29376 864 aa20.83■□□□□ 0.92
SMPD1-201ENST00000342245 PTPAQ15257 358 aa20.83■□□□□ 0.92
SMPD1-201ENST00000342245 HSP90AA4PQ58FG1 418 aa20.83■□□□□ 0.92
SMPD1-201ENST00000342245 SPATA1Q5VX52 437 aa20.83■□□□□ 0.92
SMPD1-201ENST00000342245 EMBQ6PCB8 327 aa20.83■□□□□ 0.92
SMPD1-201ENST00000342245 WDR17Q8IZU2 1322 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 ADAMTS13Q76LX8 1427 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CASP14P31944 242 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CCNHP51946 323 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CEP57Q86XR8 500 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 SAMSN1Q9NSI8 373 aaKnown RBP20.82■□□□□ 0.92
SMPD1-201ENST00000342245 TLR7Q9NYK1 1049 aaKnown RBP20.82■□□□□ 0.92
SMPD1-201ENST00000342245 E7EWF7 191 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 ITIH3Q06033 890 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 APTXQ7Z2E3 356 aaKnown RBP20.82■□□□□ 0.92
SMPD1-201ENST00000342245 ZNF473Q8WTR7 871 aaKnown RBP20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CPLX3Q8WVH0 158 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 HOOK2Q96ED9 719 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CCDC114Q96M63 670 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 FAM210AQ96ND0 272 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 CENPHQ9H3R5 247 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 HELLSQ9NRZ9 838 aa20.82■□□□□ 0.92
SMPD1-201ENST00000342245 LSP1P33241 339 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 EPHB4P54760 987 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 NNTQ13423 1086 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 ANO9A1A5B4 782 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 KIF28PB7ZC32 967 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 TEX33O43247 280 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 RWDD2BP57060 319 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 PDCLQ13371 301 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 OTUD7BQ6GQQ9 843 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 CYB5D1Q6P9G0 228 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 CCDC121Q6ZUS5 278 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 SND1Q7KZF4 910 aaKnown RBP eCLIP20.81■□□□□ 0.923e-6■■□□□ 12.2
SMPD1-201ENST00000342245 C1orf131Q8NDD1 294 aaKnown RBP20.81■□□□□ 0.92
SMPD1-201ENST00000342245 CALR3Q96L12 384 aaKnown RBP20.81■□□□□ 0.92
SMPD1-201ENST00000342245 HOMER3Q9NSC5 361 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 ABHD10Q9NUJ1 306 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 SH3BP1Q9Y3L3 701 aa20.81■□□□□ 0.92
SMPD1-201ENST00000342245 GBP2P32456 591 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-201ENST00000342245 SEMA3FQ13275 785 aa20.8■□□□□ 0.92
SMPD1-201ENST00000342245 TTC39AQ5SRH9 613 aa20.8■□□□□ 0.92
SMPD1-201ENST00000342245 MMGT1Q8N4V1 131 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms