RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 AXDND1Q5T1B0 1012 aaPredicted RBP17.37■□□□□ 0.37
TPM3-208ENST00000341485 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 TBC1D22AQ8WUA7 517 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 ANO10Q9NW15 660 aa17.37■□□□□ 0.37
TPM3-208ENST00000341485 GOLGA6L19H0YKK7 550 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 SARM1Q6SZW1 724 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
TPM3-208ENST00000341485 DRC7Q8IY82 874 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 NOL10Q9BSC4 688 aaKnown RBP17.36■□□□□ 0.37
TPM3-208ENST00000341485 CDC25BP30305 580 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 IARSP41252 1262 aaKnown RBP17.36■□□□□ 0.37
TPM3-208ENST00000341485 MFSD14BQ5SR56 506 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 CRNKL1Q9BZJ0 848 aaKnown RBP17.36■□□□□ 0.37
TPM3-208ENST00000341485 KRT23Q9C075 422 aa17.36■□□□□ 0.37
TPM3-208ENST00000341485 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 LDHCP07864 332 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 GTF2IP78347 998 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 SLC39A14Q15043 492 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 MFSD6Q6ZSS7 791 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 SLC12A7Q9Y666 1083 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 NID2Q14112 1375 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 MROH7-TTC4A0A0A0MT08 1334 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 CCDC69A6NI79 296 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 WDHD1O75717 1129 aaPredicted RBP17.35■□□□□ 0.37
TPM3-208ENST00000341485 GRIK5Q16478 980 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 CLIP2Q9UDT6 1046 aa17.35■□□□□ 0.37
TPM3-208ENST00000341485 FAM205AQ6ZU69 1335 aa17.34■□□□□ 0.37
TPM3-208ENST00000341485 STK36Q9NRP7 1315 aa17.34■□□□□ 0.37
TPM3-208ENST00000341485 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
TPM3-208ENST00000341485 CEP57L1Q8IYX8 460 aa17.34■□□□□ 0.37
TPM3-208ENST00000341485 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
TPM3-208ENST00000341485 MINDY4BA8MYZ0 360 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 ZNF202O95125 648 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 BAG3O95817 575 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 PFKFB1P16118 471 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 CMA1P23946 247 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 POLD1P28340 1107 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.37
TPM3-208ENST00000341485 LRMPQ12912 555 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 DIXDC1Q155Q3 683 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 KIAA1468Q9P260 1216 aa17.33■□□□□ 0.37
TPM3-208ENST00000341485 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 BECN2A8MW95 431 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 RRP9O43818 475 aaKnown RBP17.33■□□□□ 0.36
TPM3-208ENST00000341485 FMNL1O95466 1100 aaPredicted RBP17.33■□□□□ 0.36
TPM3-208ENST00000341485 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.365e-7■■■■□ 22.9
TPM3-208ENST00000341485 PPARAQ07869 468 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 SSRP1Q08945 709 aaKnown RBP17.33■□□□□ 0.36
TPM3-208ENST00000341485 PTPAQ15257 358 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 SLF2Q8IX21 1173 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 AOPEPQ8N6M6 819 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 TTLL6Q8N841 843 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 ZKSCAN3Q9BRR0 538 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
TPM3-208ENST00000341485 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
TPM3-208ENST00000341485 IFNAR1P17181 557 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 MRFAP1L1Q96HT8 127 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.32■□□□□ 0.36
TPM3-208ENST00000341485 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
TPM3-208ENST00000341485 C21orf2O43822 256 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
TPM3-208ENST00000341485 TRIM29Q14134 588 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 WTAPQ15007 396 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 MYRIPQ8NFW9 859 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 PRIMPOLQ96LW4 560 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 ATP8A2Q9NTI2 1148 aa17.32■□□□□ 0.36
TPM3-208ENST00000341485 MYH2Q9UKX2 1941 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 PPP6R2O75170 966 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 DPEP1P16444 411 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
TPM3-208ENST00000341485 R3HDM1Q15032 1099 aaKnown RBP17.31■□□□□ 0.36
TPM3-208ENST00000341485 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 RTFDC1Q9BY42 306 aaPredicted RBP17.31■□□□□ 0.36
TPM3-208ENST00000341485 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
TPM3-208ENST00000341485 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
TPM3-208ENST00000341485 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
TPM3-208ENST00000341485 USP5P45974 858 aa17.3■□□□□ 0.36
TPM3-208ENST00000341485 RTN1Q16799 776 aa17.3■□□□□ 0.36
TPM3-208ENST00000341485 DPCR1Q3MIW9 517 aa17.3■□□□□ 0.36
TPM3-208ENST00000341485 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
TPM3-208ENST00000341485 CACTINQ8WUQ7 758 aaKnown RBP17.3■□□□□ 0.36
TPM3-208ENST00000341485 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
TPM3-208ENST00000341485 DCP1AQ9NPI6 582 aaPredicted RBP17.3■□□□□ 0.36
TPM3-208ENST00000341485 BAZ2AQ9UIF9 1905 aaKnown RBP17.3■□□□□ 0.36
TPM3-208ENST00000341485 BTDP43251 543 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms