RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 SPECC1LQ69YQ0 1117 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CTAGE6Q86UF2 777 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 NLRP10Q86W26 655 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 NAA15Q9BXJ9 866 aaKnown RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 MKRN1Q9UHC7 482 aaKnown RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 ERVV-1B6SEH8 477 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 FANCBQ8NB91 859 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 FTOQ9C0B1 505 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 STX17P56962 302 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CKAP4Q07065 602 aaKnown RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 TTC38Q5R3I4 469 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 MICALL1Q8N3F8 863 aa13.24□□□□□ -0.29
TRAK1-202ENST00000341421 FOXP1Q9H334 677 aaPredicted RBP13.24□□□□□ -0.29
TRAK1-202ENST00000341421 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 ICE2Q659A1 982 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 IGSF22Q8N9C0 903 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 MCM9Q9NXL9 1143 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 ZNF609O15014 1411 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 BICDL2A1A5D9 508 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
TRAK1-202ENST00000341421 KRT83P78385 493 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 EXOSC10Q01780 885 aaKnown RBP13.23□□□□□ -0.29
TRAK1-202ENST00000341421 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 FUCA2Q9BTY2 467 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 C6orf50Q9HD87 102 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
TRAK1-202ENST00000341421 IFNAR1P17181 557 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ACTN2P35609 894 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ZNF174Q15697 407 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 CDHR2Q9BYE9 1310 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 USP27XA6NNY8 438 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
TRAK1-202ENST00000341421 PLCG2P16885 1265 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 MCM7P33993 719 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 HEATR3Q7Z4Q2 680 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ALS2CR12Q96Q35 445 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
TRAK1-202ENST00000341421 GNA11P29992 359 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ARID5BQ14865 1188 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 BPIFA3Q9BQP9 254 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 SERTAD1Q9UHV2 236 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 SEC31AO94979 1220 aaKnown RBP13.22□□□□□ -0.29
TRAK1-202ENST00000341421 PLCD1P51178 756 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 TTLL11Q8NHH1 800 aa13.22□□□□□ -0.29
TRAK1-202ENST00000341421 BTBD18B2RXH4 712 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 AP5Z1O43299 807 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
TRAK1-202ENST00000341421 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 JRKLQ9Y4A0 524 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-202ENST00000341421 SPECC1Q5M775 1068 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.29
TRAK1-202ENST00000341421 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
TRAK1-202ENST00000341421 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRAK1-202ENST00000341421 NAPAP54920 295 aa13.21□□□□□ -0.3
TRAK1-202ENST00000341421 KARSQ15046 597 aaKnown RBP13.21□□□□□ -0.3
TRAK1-202ENST00000341421 BRD3Q15059 726 aa13.21□□□□□ -0.3
TRAK1-202ENST00000341421 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.3
TRAK1-202ENST00000341421 FMR1NBQ8N0W7 255 aaPredicted RBP13.21□□□□□ -0.3
TRAK1-202ENST00000341421 TAF4BQ92750 862 aa13.21□□□□□ -0.3
TRAK1-202ENST00000341421 RNF26Q9BY78 433 aaPredicted RBP13.21□□□□□ -0.3
TRAK1-202ENST00000341421 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.3
TRAK1-202ENST00000341421 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.3
TRAK1-202ENST00000341421 NBPF26B4DH59 902 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 CLGNO14967 610 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 KRT86O43790 486 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
TRAK1-202ENST00000341421 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 NBPF10Q6P3W6 841 aaKnown RBP13.2□□□□□ -0.3
TRAK1-202ENST00000341421 NBPF15Q8N660 670 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 CENPHQ9H3R5 247 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 PCDHA5Q9Y5H7 936 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 STOX1Q6ZVD7 989 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
TRAK1-202ENST00000341421 TNKSO95271 1327 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms