RNA–Protein interactions for RNA: ENST00000340898.6

RNFT1P3-201, Transcript of ring finger protein, transmembrane 1 pseudogene 3, humanhuman

BASIC

Gene RNFT1P3, Length 1,052 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1P3-201ENST00000340898 CCSER2Q9H7U1 834 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 NUDCQ9Y266 331 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZNF831Q5JPB2 1677 aa8.07□□□□□ -1.12
RNFT1P3-201ENST00000340898 MRC1P22897 1456 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 ATXN7O15265 892 aaPredicted RBP8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 RPS6KA4O75676 772 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 CTSHP09668 335 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 CRKLP46109 303 aaKnown RBP8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 RAD51AP2Q09MP3 1159 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 MCM10Q7L590 875 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 FAM8A1Q9UBU6 413 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 PCDHGC4Q9Y5F7 938 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 KCPQ6ZWJ8 1503 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 SIPA1L3O60292 1781 aaPredicted RBP8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 MAP3K5Q99683 1374 aa8.06□□□□□ -1.12
RNFT1P3-201ENST00000340898 GADD45BO75293 160 aaPredicted RBP8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 POLR3DP05423 398 aaPredicted RBP8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 CYP19A1P11511 503 aaPredicted RBP8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 CES1P23141 567 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 ITGA6P23229 1130 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 POLD1P28340 1107 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 IRS1P35568 1242 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 RALBP1Q15311 655 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 TRAPPC3LQ5T215 181 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 PI16Q6UXB8 463 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 GALNT12Q8IXK2 581 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 C1orf127Q8N9H9 656 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZNF496Q96IT1 587 aaPredicted RBP8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 PPP4R2Q9NY27 417 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 MIS18AQ9NYP9 233 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 CNTN3Q9P232 1028 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 SRP68Q9UHB9 627 aaKnown RBP8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 CEMIPQ8WUJ3 1361 aa8.05□□□□□ -1.12
RNFT1P3-201ENST00000340898 CNTNAP4Q9C0A0 1308 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 DLG5Q8TDM6 1919 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 PRAMEF22A3QJZ6 481 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 GYS1P13807 737 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 DBN1Q16643 649 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 CHRDQ9H2X0 955 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 PRKRIP1Q9H875 184 aaPredicted RBP8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZBTB1Q9Y2K1 713 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 UBR2Q8IWV8 1755 aa8.04□□□□□ -1.12
RNFT1P3-201ENST00000340898 EREGO14944 169 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 TEFQ10587 303 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 GNL2Q13823 731 aaKnown RBP8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 CCINQ13939 588 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 TAF1CQ15572 869 aaPredicted RBP8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 CCDC184Q52MB2 194 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 TRERF1Q96PN7 1200 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 THUMPD2Q9BTF0 503 aaKnown RBP8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 BCO2Q9BYV7 579 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 USP16Q9Y5T5 823 aa8.03□□□□□ -1.12
RNFT1P3-201ENST00000340898 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 PPFIA3O75145 1194 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 SASH3O75995 380 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 A1BGP04217 495 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 MMP10P09238 476 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 USP17L7P0C7H9 530 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 EDN3P14138 238 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 RFC4P35249 363 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 LAMC2Q13753 1193 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 NXPE4Q6UWF7 544 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 SV2AQ7L0J3 742 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 HS2ST1Q7LGA3 356 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 C4AP0C0L4 1744 aa8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 CICQ96RK0 1608 aaPredicted RBP8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 SOS1Q07889 1333 aaPredicted RBP8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 MYBBP1AQ9BQG0 1328 aaKnown RBP8.02□□□□□ -1.13
RNFT1P3-201ENST00000340898 HEG1Q9ULI3 1381 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 CDC14CA4D256 554 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 PHF20L1A8MW92 1017 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 HTATSF1O43719 755 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 HMGB2P26583 209 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 CANXP27824 592 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 TM4SF1P30408 202 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 PIP4K2AP48426 406 aaPredicted RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 ST13P50502 369 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 TAF7Q15545 349 aaPredicted RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 CCDC146Q8IYE0 955 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 ZNF654Q8IZM8 581 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 UBXN4Q92575 508 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 GTPBP3Q969Y2 492 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 CAPN10Q9HC96 672 aa8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
RNFT1P3-201ENST00000340898 EFSO43281 561 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms