RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FLRT1Q9NZU1 646 aa20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 MYO5AQ9Y4I1 1855 aaKnown RBP20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 FOCADQ5VW36 1801 aa20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 ZNF521Q96K83 1311 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 ATN1P54259 1190 aaPredicted RBP20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 PDE3AQ14432 1141 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 ZNF697Q5TEC3 545 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 TRMT44Q8IYL2 757 aaKnown RBP20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 PAGR1Q9BTK6 254 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 HMG20BQ9P0W2 317 aa20.29■□□□□ 0.84
NECTIN1-202ENST00000340882 A0A1B0GUL7 405 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 UBTFL1P0CB47 393 aaPredicted RBP20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 MAPK4P31152 587 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 RGS2P41220 211 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 PLEKHH3Q7Z736 793 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 SH3RF3Q8TEJ3 882 aaPredicted RBP20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 APBA2Q99767 749 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 LBHD1Q9BQE6 289 aaPredicted RBP20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 COPRSQ9NQ92 184 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 PRDM6Q9NQX0 595 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 TMOD4Q9NZQ9 345 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 NDUFB9Q9Y6M9 179 aa20.28■□□□□ 0.84
NECTIN1-202ENST00000340882 TFCP2Q12800 502 aa20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 SHHQ15465 462 aa20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 TEX11Q8IYF3 940 aa20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 MAFAQ8NHW3 353 aaPredicted RBP20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 HERC5Q9UII4 1024 aaKnown RBP20.27■□□□□ 0.84
NECTIN1-202ENST00000340882 TTC28Q96AY4 2481 aa20.27■□□□□ 0.83
NECTIN1-202ENST00000340882 CNMDO75829 334 aa20.26■□□□□ 0.83
NECTIN1-202ENST00000340882 GDF11O95390 407 aa20.26■□□□□ 0.83
NECTIN1-202ENST00000340882 MYLIPQ8WY64 445 aa20.26■□□□□ 0.83
NECTIN1-202ENST00000340882 TTYH1Q9H313 450 aaPredicted RBP20.26■□□□□ 0.83
NECTIN1-202ENST00000340882 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
NECTIN1-202ENST00000340882 MUC3AQ02505 3323 aa20.25■□□□□ 0.83
NECTIN1-202ENST00000340882 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
NECTIN1-202ENST00000340882 MAP2K5Q13163 448 aa20.25■□□□□ 0.83
NECTIN1-202ENST00000340882 PI4KBQ9UBF8 816 aa20.25■□□□□ 0.83
NECTIN1-202ENST00000340882 C19orf81C9J6K1 198 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 MAP4K4O95819 1239 aaPredicted RBP20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 LDHCP07864 332 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 ASNSP08243 561 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 RTP1P59025 263 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 SPATA5Q8NB90 893 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 TRPV1Q8NER1 839 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 EDC3Q96F86 508 aaKnown RBP20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 RAI14Q9P0K7 980 aa20.24■□□□□ 0.83
NECTIN1-202ENST00000340882 GSTO1P78417 241 aa20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 MVPQ14764 893 aaKnown RBP20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 CCAR1Q8IX12 1150 aaKnown RBP20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 FAM9BQ8IZU0 186 aa20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 DDX20Q9UHI6 824 aaKnown RBP20.23■□□□□ 0.83
NECTIN1-202ENST00000340882 METTL16Q86W50 562 aaKnown RBP20.22■□□□□ 0.83
NECTIN1-202ENST00000340882 MAPKAPK5Q8IW41 473 aa20.22■□□□□ 0.83
NECTIN1-202ENST00000340882 NEUROD6Q96NK8 337 aa20.22■□□□□ 0.83
NECTIN1-202ENST00000340882 ZBTB21Q9ULJ3 1066 aa20.22■□□□□ 0.83
NECTIN1-202ENST00000340882 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
NECTIN1-202ENST00000340882 CNGA1P29973 690 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 CYP2C19P33261 490 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 MCAMP43121 646 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 GJC2Q5T442 439 aaPredicted RBP20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 LPAR1Q92633 364 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 MEIS3Q99687 375 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 PALD1Q9ULE6 856 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 MYH1P12882 1939 aa20.21■□□□□ 0.83
NECTIN1-202ENST00000340882 DNM1LO00429 736 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 PTPREP23469 700 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 MFSD14CQ5VZR4 134 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 ADGRA1Q86SQ6 560 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 BADQ92934 168 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 DHX36Q9H2U1 1008 aaKnown RBP20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
NECTIN1-202ENST00000340882 IGHA2P01877 340 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 ARID4AP29374 1257 aaPredicted RBP20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 ZYXQ15942 572 aaKnown RBP20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 WDR78Q5VTH9 848 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 USP17L2Q6R6M4 530 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 SH3RF1Q7Z6J0 888 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 BTBD7Q9P203 1132 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 PRKAG2Q9UGJ0 569 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 RABGAP1Q9Y3P9 1069 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 FLT1P17948 1338 aa20.19■□□□□ 0.82
NECTIN1-202ENST00000340882 SLC15A5A6NIM6 579 aa20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 FOXP4Q8IVH2 680 aaPredicted RBP20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 GTF3C2Q8WUA4 911 aaPredicted RBP20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 PRDM5Q9NQX1 630 aaPredicted RBP20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 LRP2BPQ9P2M1 347 aa20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 SAP30BPQ9UHR5 308 aaKnown RBP20.18■□□□□ 0.82
NECTIN1-202ENST00000340882 SMCHD1A6NHR9 2005 aa20.17■□□□□ 0.82
NECTIN1-202ENST00000340882 CYBAP13498 195 aa20.17■□□□□ 0.82
NECTIN1-202ENST00000340882 ATP2B2Q01814 1243 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms