RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MYL5Q02045 173 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 CAPN12Q6ZSI9 719 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 C17orf53Q8N3J3 647 aaPredicted RBP14.18□□□□□ -0.14
USP47-202ENST00000339865 P3H4Q92791 437 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 AK9Q5TCS8 1911 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 SBNO2Q9Y2G9 1366 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 BACH1O14867 736 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 PHBP35232 272 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 PRKG1Q13976 671 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 HDAC11Q96DB2 347 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 HMGB2P26583 209 aaKnown RBP14.18□□□□□ -0.14
USP47-202ENST00000339865 LMNB2Q03252 620 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 TRIM60Q495X7 471 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 FGD4Q96M96 766 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 IFT122Q9HBG6 1241 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 SLC4A7Q9Y6M7 1214 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
USP47-202ENST00000339865 FAM186BQ8IYM0 893 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 ANO3Q9BYT9 981 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 MKL2Q9ULH7 1088 aa14.18□□□□□ -0.14
USP47-202ENST00000339865 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
USP47-202ENST00000339865 CNNM2Q9H8M5 875 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 HOMER3Q9NSC5 361 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 IFT88Q13099 833 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 MYO1AQ9UBC5 1043 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 CCDC85BQ15834 202 aaPredicted RBP14.17□□□□□ -0.14
USP47-202ENST00000339865 BMP2KLQ5H9B9 411 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 CENPKQ9BS16 269 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 SART1O43290 800 aaKnown RBP14.17□□□□□ -0.14
USP47-202ENST00000339865 GNAQP50148 359 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 BLVRAP53004 296 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 PICALMQ13492 652 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 INTUQ9ULD6 942 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 IQUBQ8NA54 791 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 TRIM14Q14142 442 aa14.17□□□□□ -0.14
USP47-202ENST00000339865 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
USP47-202ENST00000339865 LDHCP07864 332 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 KRT80Q6KB66 452 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 MAP3K2Q9Y2U5 619 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 CCDC169A6NNP5 214 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 CCT5P48643 541 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 TNNI2P48788 182 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 SLC12A1Q13621 1099 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 RRP36Q96EU6 259 aaKnown RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 TEKT2Q9UIF3 430 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 IFNB1P01574 187 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 CDCA7Q9BWT1 371 aaPredicted RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 SMYD2Q9NRG4 433 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 POLR2DO15514 142 aaKnown RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 SLC4A1P02730 911 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 SV2BQ7L1I2 683 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 ABL1P00519 1130 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 LMNAP02545 664 aaKnown RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 SNX1Q13596 522 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 TSTA3Q13630 321 aaPredicted RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 E2F4Q16254 413 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 SYCE1Q8N0S2 351 aa14.16□□□□□ -0.14
USP47-202ENST00000339865 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
USP47-202ENST00000339865 THAP12O43422 761 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 RIOK1Q9BRS2 568 aaKnown RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 MAD1L1Q9Y6D9 718 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 RINLQ6ZS11 566 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 KIAA2013Q8IYS2 634 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 SPATA17Q96L03 361 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 TRAF1Q13077 416 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 CCDC92Q53HC0 331 aaPredicted RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 CDC5LQ99459 802 aaKnown RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 TSC22D3Q99576 134 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 RNF217Q8TC41 542 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 SYNRGQ9UMZ2 1314 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 MICAL3Q7RTP6 2002 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 LRRC8CQ8TDW0 803 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 EEF1GP26641 437 aaKnown RBP14.15□□□□□ -0.14
USP47-202ENST00000339865 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 ZNF280CQ8ND82 737 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 SATB2Q9UPW6 733 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 DAAM1Q9Y4D1 1078 aa14.15□□□□□ -0.14
USP47-202ENST00000339865 FBXW4P57775 412 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 ALDH1L2Q3SY69 923 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 NR1H4Q96RI1 486 aaPredicted RBP14.14□□□□□ -0.15
USP47-202ENST00000339865 SMTNP53814 917 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 CYP7A1P22680 504 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 ACBD5Q5T8D3 534 aaPredicted RBP14.14□□□□□ -0.15
USP47-202ENST00000339865 CNNM4Q6P4Q7 775 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 CCNT1O60563 726 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms