RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 RNF225M0QZC1 329 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-201ENST00000339754 MYO1FO00160 1098 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 CPLX1O14810 134 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 ZMYND10O75800 440 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 KRT40Q6A162 431 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 CPLX2Q6PUV4 134 aaKnown RBP10.64□□□□□ -0.71
NECAP1-201ENST00000339754 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 SELENOOQ9BVL4 669 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
NECAP1-201ENST00000339754 SERTAD1Q9UHV2 236 aa10.64□□□□□ -0.71
NECAP1-201ENST00000339754 MAST3O60307 1309 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 HEG1Q9ULI3 1381 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GOLIM4O00461 696 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 PRC1O43663 620 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 FSBPO95073 299 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 ANTXR2P58335 489 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 TTC39AQ5SRH9 613 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 CNGA4Q8IV77 575 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 MB21D2Q8IYB1 491 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GRAMD1CQ8IYS0 662 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 STK11IPQ8N1F8 1099 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 SPATA20Q8TB22 786 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 TACO1Q9BSH4 297 aaKnown RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 CRACR2AQ9BSW2 395 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 ALG1Q9BT22 464 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 HDAC6Q9UBN7 1215 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 SAMM50Q9Y512 469 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GNGT1P63211 74 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GRIN1Q05586 938 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 CDKAL1Q5VV42 579 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 SPATA1Q5VX52 437 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GBP6Q6ZN66 633 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 AMOTL1Q8IY63 956 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 GSPT2Q8IYD1 628 aaKnown RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
NECAP1-201ENST00000339754 ATXN2Q99700 1313 aaKnown RBP10.63□□□□□ -0.71
NECAP1-201ENST00000339754 MYH8P13535 1937 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 NEURL1BA8MQ27 555 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 PSMD14O00487 310 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 FOXP2O15409 715 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 POLR2DO15514 142 aaKnown RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 SRGAP2O75044 1071 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 SATB1Q01826 763 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 TRDNQ13061 729 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 GCKRQ14397 625 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 KRI1Q8N9T8 703 aaKnown RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 ZKSCAN4Q969J2 545 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 TRIM10Q9UDY6 481 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 REXO2Q9Y3B8 237 aaKnown RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA6BA6NDN3 693 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 M0R2C6 588 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 ENC1O14682 589 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 TDO2P48775 406 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 PDIA6Q15084 440 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 TICAM2Q86XR7 235 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 CD248Q9HCU0 757 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 ABHD10Q9NUJ1 306 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 MCM8Q9UJA3 840 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 CCDC9Q9Y3X0 531 aaKnown RBP10.62□□□□□ -0.71
NECAP1-201ENST00000339754 ITIH6Q6UXX5 1313 aa10.62□□□□□ -0.71
NECAP1-201ENST00000339754 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 RNF113AO15541 343 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 DDX58O95786 925 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 SCP2P22307 547 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 HAND2P61296 217 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 SKOR1P84550 965 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 CUL4BQ13620 913 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 PAPD7Q5XG87 772 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 POTEHQ6S545 545 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 SAR1BQ9Y6B6 198 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 MEFVO15553 781 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 ATP1A1P05023 1023 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 BRD2P25440 801 aaKnown RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 HSPA2P54652 639 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 TTC19Q6DKK2 380 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 MPRIPQ6WCQ1 1025 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 B4GALNT4Q76KP1 1039 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 MIEF2Q96C03 454 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 DDX21Q9NR30 783 aaKnown RBP eCLIP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 FBXO2Q9UK22 296 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-201ENST00000339754 GUCA1BQ9UMX6 200 aa10.61□□□□□ -0.71
NECAP1-201ENST00000339754 DDX60Q8IY21 1712 aaKnown RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 CHUKO15111 745 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 PTPREP23469 700 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms