RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TRIM29Q14134 588 aa18.84■□□□□ 0.61
LITAF-201ENST00000339430 IRS2Q9Y4H2 1338 aa18.83■□□□□ 0.61
LITAF-201ENST00000339430 RIOK3O14730 519 aaKnown RBP18.83■□□□□ 0.61
LITAF-201ENST00000339430 LRRC8AQ8IWT6 810 aa18.83■□□□□ 0.61
LITAF-201ENST00000339430 CMTR1Q8N1G2 835 aaKnown RBP18.83■□□□□ 0.61
LITAF-201ENST00000339430 CLIC6Q96NY7 704 aa18.83■□□□□ 0.61
LITAF-201ENST00000339430 ABCF2Q9UG63 623 aa18.83■□□□□ 0.61
LITAF-201ENST00000339430 GGA1Q9UJY5 639 aa18.83■□□□□ 0.61
LITAF-201ENST00000339430 GUCY1A2P33402 732 aa18.83■□□□□ 0.6
LITAF-201ENST00000339430 LIFRP42702 1097 aa18.83■□□□□ 0.6
LITAF-201ENST00000339430 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
LITAF-201ENST00000339430 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.6
LITAF-201ENST00000339430 KRT23Q9C075 422 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 CNNM2Q9H8M5 875 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 POLLQ9UGP5 575 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 COL1A1P02452 1464 aaPredicted RBP18.82■□□□□ 0.6
LITAF-201ENST00000339430 ATP2B4P23634 1241 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 SYKP43405 635 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 STYK1Q6J9G0 422 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 SHC4Q6S5L8 630 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 ADGRA1Q86SQ6 560 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.82■□□□□ 0.6
LITAF-201ENST00000339430 NACAP1Q9BZK3 213 aa18.82■□□□□ 0.6
LITAF-201ENST00000339430 LRRC37AA6NMS7 1700 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 GTF2F1P35269 517 aaKnown RBP eCLIP18.81■□□□□ 0.6
LITAF-201ENST00000339430 PTPAQ15257 358 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 TBC1D16Q8TBP0 767 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 MINDY4BA8MYZ0 360 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 CYP7A1P22680 504 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 WTAPQ15007 396 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 KCNJ14Q9UNX9 436 aa18.81■□□□□ 0.6
LITAF-201ENST00000339430 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
LITAF-201ENST00000339430 NLRP12P59046 1061 aa18.8■□□□□ 0.6
LITAF-201ENST00000339430 TPD52L1Q16890 204 aaPredicted RBP18.8■□□□□ 0.6
LITAF-201ENST00000339430 C10orf71Q711Q0 1435 aa18.8■□□□□ 0.6
LITAF-201ENST00000339430 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
LITAF-201ENST00000339430 FMNL1O95466 1100 aaPredicted RBP18.79■□□□□ 0.6
LITAF-201ENST00000339430 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.6
LITAF-201ENST00000339430 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 MTFR1LQ9H019 292 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
LITAF-201ENST00000339430 RAI14Q9P0K7 980 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
LITAF-201ENST00000339430 BTBD18B2RXH4 712 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 SEMA3EO15041 775 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 PPP6R2O75170 966 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 SMC2O95347 1197 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 TNNT1P13805 278 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 GNAT2P19087 354 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 RTN1Q16799 776 aa18.79■□□□□ 0.6
LITAF-201ENST00000339430 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
LITAF-201ENST00000339430 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
LITAF-201ENST00000339430 ERICH2A1L162 156 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 USP27XA6NNY8 438 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
LITAF-201ENST00000339430 SPECC1Q5M775 1068 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 C15orf52Q6ZUT6 534 aaKnown RBP18.78■□□□□ 0.6
LITAF-201ENST00000339430 ZNF804AQ7Z570 1209 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 NBPF11Q86T75 865 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 UBE2Q2Q8WVN8 375 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 CNKSR1Q969H4 720 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 LTBP1Q14766 1721 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 SKILP12757 684 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 IFNAR1P17181 557 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 PPARAQ07869 468 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 PNOCQ13519 176 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 XPO4Q9C0E2 1151 aaKnown RBP18.78■□□□□ 0.6
LITAF-201ENST00000339430 IFNKQ9P0W0 207 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 JAG2Q9Y219 1238 aa18.78■□□□□ 0.6
LITAF-201ENST00000339430 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
LITAF-201ENST00000339430 HPSEQ9Y251 543 aa18.77■□□□□ 0.6
LITAF-201ENST00000339430 STK36Q9NRP7 1315 aa18.77■□□□□ 0.6
LITAF-201ENST00000339430 SLX4Q8IY92 1834 aa18.77■□□□□ 0.6
LITAF-201ENST00000339430 POLD1P28340 1107 aa18.77■□□□□ 0.6
LITAF-201ENST00000339430 DIS3L2Q8IYB7 885 aaKnown RBP18.77■□□□□ 0.6
LITAF-201ENST00000339430 BPIFA3Q9BQP9 254 aa18.77■□□□□ 0.6
LITAF-201ENST00000339430 BAZ2AQ9UIF9 1905 aaKnown RBP18.77■□□□□ 0.59
LITAF-201ENST00000339430 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
LITAF-201ENST00000339430 CCZ1BP86790 482 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 CCZ1P86791 482 aaPredicted RBP18.76■□□□□ 0.59
LITAF-201ENST00000339430 RESP18Q5W5W9 173 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 NOSTRINQ8IVI9 506 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 TRIM22Q8IYM9 498 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 RGS22Q8NE09 1264 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 MAGEB6P1A0A0J9YX57 407 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 RIMBP2O15034 1052 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 MMP1P03956 469 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 NCAPHQ15003 741 aa18.76■□□□□ 0.59
LITAF-201ENST00000339430 GLIPR1L2Q4G1C9 344 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms