RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DNTTIP2Q5QJE6 756 aaKnown RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 FAM173BQ6P4H8 233 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 LUZP1Q86V48 1076 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 CCAR1Q8IX12 1150 aaKnown RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 CEP57L1Q8IYX8 460 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 NCOA7Q8NI08 942 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 MRPS27Q92552 414 aaKnown RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 BEGAINQ9BUH8 593 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
RTN3-201ENST00000338850 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 MORC2Q9Y6X9 1032 aaPredicted RBP12.5□□□□□ -0.41
RTN3-201ENST00000338850 MYO5AQ9Y4I1 1855 aaKnown RBP12.49□□□□□ -0.41
RTN3-201ENST00000338850 PSME4Q14997 1843 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 GOLGA6L19H0YKK7 550 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 M0R2C6 588 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
RTN3-201ENST00000338850 FOXP2O15409 715 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 CDKL5O76039 1030 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 USP17L8P0C7I0 530 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 RCAN1P53805 252 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 GSDMDP57764 484 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 SCARF1Q14162 830 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 LRRC24Q50LG9 513 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 DACT2Q5SW24 774 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 TXNRD3Q86VQ6 643 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 SULF1Q8IWU6 871 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
RTN3-201ENST00000338850 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 OSBP2Q969R2 916 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 NOL10Q9BSC4 688 aaKnown RBP12.49□□□□□ -0.41
RTN3-201ENST00000338850 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
RTN3-201ENST00000338850 PYCARDQ9ULZ3 195 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 LEMD3Q9Y2U8 911 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
RTN3-201ENST00000338850 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 FDPSP14324 419 aaKnown RBP12.48□□□□□ -0.41
RTN3-201ENST00000338850 KLRK1P26718 216 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 ARID4AP29374 1257 aaPredicted RBP12.48□□□□□ -0.41
RTN3-201ENST00000338850 TIMM10P62072 90 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
RTN3-201ENST00000338850 CKAP2LQ8IYA6 745 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 CDCA5Q96FF9 252 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 MPHOSPH8Q99549 860 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 OSBPL5Q9H0X9 879 aaPredicted RBP12.48□□□□□ -0.41
RTN3-201ENST00000338850 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
RTN3-201ENST00000338850 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 CA12O43570 354 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 PTGS1P23219 599 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 ADD2P35612 726 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 NOGQ13253 232 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
RTN3-201ENST00000338850 CAMK4Q16566 473 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 RGMBQ6NW40 437 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 TMED8Q6PL24 325 aaPredicted RBP12.47□□□□□ -0.41
RTN3-201ENST00000338850 VGLL2Q8N8G2 317 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 C2orf69Q8N8R5 385 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 MXD3Q9BW11 206 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
RTN3-201ENST00000338850 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
RTN3-201ENST00000338850 NEDD4P46934 1319 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 PITPNM2Q9BZ72 1349 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 FAM155AB1AL88 458 aaPredicted RBP12.46□□□□□ -0.41
RTN3-201ENST00000338850 PRC1O43663 620 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 PPP6R2O75170 966 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 CHRNDQ07001 517 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 CPLX2Q6PUV4 134 aaKnown RBP12.46□□□□□ -0.41
RTN3-201ENST00000338850 CCDC186Q7Z3E2 898 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 RALYLQ86SE5 291 aaKnown RBP12.46□□□□□ -0.41
RTN3-201ENST00000338850 SGMS1Q86VZ5 419 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 C8orf76Q96K31 380 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 ZNF830Q96NB3 372 aaPredicted RBP12.46□□□□□ -0.41
RTN3-201ENST00000338850 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.41
RTN3-201ENST00000338850 POLR2AP24928 1970 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms