RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TNKSO95271 1327 aa17.3■□□□□ 0.36
TNFSF13-201ENST00000338784 SERPINC1P01008 464 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 KCNJ6P48051 423 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 UBASH3AP57075 661 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 NR5A1Q13285 461 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 SPECC1Q5M775 1068 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 PPP4R3BQ5MIZ7 849 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 ERFEQ4G0M1 354 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
TNFSF13-201ENST00000338784 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 BCORQ6W2J9 1755 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 XBP1P17861 261 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 BRD2P25440 801 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 E4F1Q66K89 784 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 KIF18AQ8NI77 898 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 ZSCAN10Q96SZ4 725 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 SRPRBQ9Y5M8 271 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 ZNF831Q5JPB2 1677 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 PSDA5PKW4 1024 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 GRIN1Q05586 938 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 POSTNQ15063 836 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 NOL10Q9BSC4 688 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 BRIP1Q9BX63 1249 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 CABP5Q9NP86 173 aa17.28■□□□□ 0.36
TNFSF13-201ENST00000338784 FOXN1O15353 648 aa17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 POLR2DO15514 142 aaKnown RBP17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 ENAHQ8N8S7 591 aaPredicted RBP17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 MINPP1Q9UNW1 487 aa17.27■□□□□ 0.36
TNFSF13-201ENST00000338784 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 BMP6P22004 513 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 IFIT1BQ5T764 474 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 NT5DC1Q5TFE4 455 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 DPF2Q92785 391 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 CHD4Q14839 1912 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 LAMB2P55268 1798 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 KANK3Q6NY19 840 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 IQCA1Q86XH1 822 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 SERTAD1Q9UHV2 236 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 DACH1Q9UI36 760 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
TNFSF13-201ENST00000338784 SMIM22K7EJ46 135 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 KCNQ2O43526 872 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 PDE4BQ07343 736 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 VSTM4Q8IW00 320 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 MLKLQ8NB16 471 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 SMARCE1Q969G3 411 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 COL4A1P02462 1669 aa17.25■□□□□ 0.35
TNFSF13-201ENST00000338784 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 TUBB4AP04350 444 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 FGRP09769 529 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CALM1P0DP23 149 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CALM2P0DP24 149 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CALM3P0DP25 149 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 SARSP49591 514 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 PKN1Q16512 942 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 TRIML1Q8N9V2 468 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CYP2D7A0A087X1C5 515 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 SEMA3EO15041 775 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CCP110O43303 1012 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 TOP1P11387 765 aaKnown RBP17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 KRT2P35908 639 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 FUT2Q10981 343 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 CSRNP2Q9H175 543 aa17.24■□□□□ 0.35
TNFSF13-201ENST00000338784 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 PRDM1O75626 825 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 MORC3Q14149 939 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 PDILTQ8N807 584 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 LINC00116Q8NCU8 138 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms