RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 A0A1W2PQ27 194 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 A0A1W2PQ64 194 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 A0A1W2PQD8 194 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 DEXIO95424 95 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 ADCY5O95622 1261 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 NR5A1Q13285 461 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 MFSD14BQ5SR56 506 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 CATIPQ7Z7H3 387 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 MPNDQ8N594 471 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
SCNN1A-202ENST00000338748 KINO60870 393 aaKnown RBP18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 SRGNP10124 158 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 PPP4CP60510 307 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 SLC39A14Q15043 492 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 PKN1Q16512 942 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 MAPKAPK5Q8IW41 473 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 OXER1Q8TDS5 423 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 DNAJC25Q9H1X3 360 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 CBX8Q9HC52 389 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 RIMBP2O15034 1052 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 MMP10P09238 476 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 BTDP43251 543 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 PLCD1P51178 756 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 NOSTRINQ8IVI9 506 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 NLGN1Q8N2Q7 840 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 WASF1Q92558 559 aa18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 SAP30BPQ9UHR5 308 aaKnown RBP18.81■□□□□ 0.6
SCNN1A-202ENST00000338748 TSPY2A6NKD2 308 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 CLCN1P35523 988 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 TOB1P50616 345 aaPredicted RBP18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 GSTO1P78417 241 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 PDE4BQ07343 736 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 ZSCAN30Q86W11 494 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 ATP6V0A2Q9Y487 856 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 PLCB2Q00722 1185 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 SP8Q8IXZ3 490 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 VPS54Q9P1Q0 977 aa18.8■□□□□ 0.6
SCNN1A-202ENST00000338748 ROBO3Q96MS0 1386 aa18.79■□□□□ 0.6
SCNN1A-202ENST00000338748 BAG3O95817 575 aa18.79■□□□□ 0.6
SCNN1A-202ENST00000338748 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
SCNN1A-202ENST00000338748 HS1BP3Q53T59 392 aa18.79■□□□□ 0.6
SCNN1A-202ENST00000338748 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
SCNN1A-202ENST00000338748 DDX60LQ5H9U9 1706 aaKnown RBP18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 DDAH1O94760 285 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 C11orf57Q6ZUT1 292 aaPredicted RBP18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 TMTC3Q6ZXV5 915 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 CLIC6Q96NY7 704 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 CNTNAP5Q8WYK1 1306 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 GPR75-ASB3A0A0A6YYF3 556 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 PFKFB1P16118 471 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 GTF2IP78347 998 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 TFAP4Q01664 338 aa18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 SRBD1Q8N5C6 995 aaKnown RBP18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 TNS1Q9HBL0 1735 aaKnown RBP18.78■□□□□ 0.6
SCNN1A-202ENST00000338748 FAM205CA6NFA0 338 aa18.77■□□□□ 0.6
SCNN1A-202ENST00000338748 RHBDL3P58872 404 aa18.77■□□□□ 0.6
SCNN1A-202ENST00000338748 SHC4Q6S5L8 630 aa18.77■□□□□ 0.6
SCNN1A-202ENST00000338748 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.6
SCNN1A-202ENST00000338748 USP17L3A6NCW0 530 aa18.77■□□□□ 0.59
SCNN1A-202ENST00000338748 USP17L4A6NCW7 530 aa18.77■□□□□ 0.59
SCNN1A-202ENST00000338748 VEGFAP15692 232 aaPredicted RBP18.77■□□□□ 0.59
SCNN1A-202ENST00000338748 PPP2R5BQ15173 497 aa18.77■□□□□ 0.59
SCNN1A-202ENST00000338748 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.59
SCNN1A-202ENST00000338748 CTAGE5O15320 804 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 LDHCP07864 332 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 NPR1P16066 1061 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 CMA1P23946 247 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 ZNF165P49910 485 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 EARS2Q5JPH6 523 aaKnown RBP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 TEX11Q8IYF3 940 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 NOL10Q9BSC4 688 aaKnown RBP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 MXD3Q9BW11 206 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 FOXP1Q9H334 677 aaPredicted RBP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 RBM28Q9NW13 759 aaKnown RBP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 FLT1P17948 1338 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 PRPF3O43395 683 aaKnown RBP18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 IGSF3O75054 1194 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 PPP6R2O75170 966 aa18.76■□□□□ 0.59
SCNN1A-202ENST00000338748 GAKO14976 1311 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 FAM205AQ6ZU69 1335 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 SNED1Q8TER0 1413 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 ZNF202O95125 648 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 CALM1P0DP23 149 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 CALM2P0DP24 149 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 CALM3P0DP25 149 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 GRIN1Q05586 938 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 TMC4Q7Z404 712 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 PIBF1Q8WXW3 757 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 CCDC39Q9UFE4 941 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
SCNN1A-202ENST00000338748 F8W031 263 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms