RNA–Protein interactions for RNA: ENST00000338733.9

TBCCD1-201, Transcript of TBCC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCCD1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1-201ENST00000338733 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
TBCCD1-201ENST00000338733 AS3MTQ9HBK9 375 aa11.25□□□□□ -0.61
TBCCD1-201ENST00000338733 PRDM5Q9NQX1 630 aaPredicted RBP11.25□□□□□ -0.61
TBCCD1-201ENST00000338733 CHMP3Q9Y3E7 222 aa11.25□□□□□ -0.61
TBCCD1-201ENST00000338733 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 IGHA2P01877 340 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 MRE11P49959 708 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 FPGSQ05932 587 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 GPR142Q7Z601 462 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 EDC3Q96F86 508 aaKnown RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 SLC15A5A6NIM6 579 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 RAB30Q15771 203 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 TRIM60Q495X7 471 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 ZNF594Q96JF6 807 aaPredicted RBP11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
TBCCD1-201ENST00000338733 SALL1Q9NSC2 1324 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 RLFQ13129 1914 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 ERC2O15083 957 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 FOXK2Q01167 660 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 SPP2Q13103 211 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 CLTBP09497 229 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 RGS3P49796 1198 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 HERVK_113P62684 666 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 ERVK-24P63145 666 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 CCL14Q16627 93 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 RASIP1Q5U651 963 aa11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
TBCCD1-201ENST00000338733 C19orf81C9J6K1 198 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 SH3BP5LQ7L8J4 393 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 ZFPM1Q8IX07 1006 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 PPM1EQ8WY54 764 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 RBPJLQ9UBG7 517 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 COG5Q9UP83 839 aa11.22□□□□□ -0.61
TBCCD1-201ENST00000338733 PRR33A8MZF0 331 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 PI4K2BG5E9Z4 385 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 PDE8BO95263 885 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 EPHB4P54760 987 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 HMGCS2P54868 508 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 CCNA1P78396 465 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 FLIIQ13045 1269 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 TMOD4Q9NZQ9 345 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 IQSEC3Q9UPP2 1182 aaPredicted RBP11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 PIEZO1Q92508 2521 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 GAKO14976 1311 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 POU3F3P20264 500 aaPredicted RBP11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 ADGRE1Q14246 886 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 RALBP1Q15311 655 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 SLF2Q8IX21 1173 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 VGLL2Q8N8G2 317 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 TOX2Q96NM4 488 aa11.21□□□□□ -0.61
TBCCD1-201ENST00000338733 CYBAP13498 195 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 ATP2B2Q01814 1243 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 TXNRD2Q9NNW7 524 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 MSRAQ9UJ68 235 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 AK9Q5TCS8 1911 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 RAG1P15918 1043 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 TLE2Q04725 743 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 G2E3Q7L622 706 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 NECAB3Q96P71 396 aaPredicted RBP11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 PBX4Q9BYU1 374 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 C11orf16Q9NQ32 467 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 RABGAP1Q9Y3P9 1069 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
TBCCD1-201ENST00000338733 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 SEMA3EO15041 775 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 FGFR2P21802 821 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 PTPREP23469 700 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 CAP2P40123 477 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 BACE1P56817 501 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 PPIGQ13427 754 aaKnown RBP eCLIP11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 GJC2Q5T442 439 aaPredicted RBP11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 DDTLA6NHG4 134 aaPredicted RBP11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 GRM8O00222 908 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 SEPT4O43236 478 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 CNGA1P29973 690 aa11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 PUM3Q15397 648 aaKnown RBP11.19□□□□□ -0.62
TBCCD1-201ENST00000338733 METTL24Q5JXM2 366 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms