RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 IRS2Q9Y4H2 1338 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 LY75O60449 1722 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 KCNQ4P56696 695 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 NR5A1Q13285 461 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 FILIP1Q7Z7B0 1213 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 PCDHB6Q9Y5E3 794 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 USP27XA6NNY8 438 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 NT5DC1Q5TFE4 455 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
ARHGEF1-201ENST00000337665 TNNT1P13805 278 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 BMP6P22004 513 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 NUP133Q8WUM0 1156 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 PRPF3O43395 683 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 ARMCX5Q6P1M9 558 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 SMIM5Q71RC9 77 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 SRPRBQ9Y5M8 271 aaKnown RBP16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 THSD7AQ9UPZ6 1657 aa16.58■□□□□ 0.24
ARHGEF1-201ENST00000337665 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 TPM4P67936 248 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 TPD52L1Q16890 204 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 SARSP49591 514 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 FANCCQ00597 558 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 MECOMQ03112 1051 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 TROAPQ12815 778 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 VPS72Q15906 364 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 FOXN1O15353 648 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 ORC4O43929 436 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 TM4SF1P30408 202 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
ARHGEF1-201ENST00000337665 MYO1BO43795 1136 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 MYL5Q02045 173 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 SMC2O95347 1197 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 ANKRD7Q92527 254 aa16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 RBM28Q9NW13 759 aaKnown RBP16.56■□□□□ 0.24
ARHGEF1-201ENST00000337665 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 KCNJ6P48051 423 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 EVX2Q03828 476 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 TMED8Q6PL24 325 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 ANKRD2Q9GZV1 360 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 DDAH1O94760 285 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 PDE4BQ07343 736 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
ARHGEF1-201ENST00000337665 ACTN4O43707 911 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CALM1P0DP23 149 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CALM2P0DP24 149 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CALM3P0DP25 149 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 NPY5RQ15761 445 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 EARS2Q5JPH6 523 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CATIPQ7Z7H3 387 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 SPATA20Q8TB22 786 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 MAN1B1Q9UKM7 699 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 USP17L21D6R901 530 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 HIBADHP31937 336 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 POSTNQ15063 836 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 SYCP1Q15431 976 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 SETDB2Q96T68 719 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 SBK1Q52WX2 424 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 DPF2Q92785 391 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 NOL10Q9BSC4 688 aaKnown RBP16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 VPS54Q9P1Q0 977 aa16.54■□□□□ 0.24
ARHGEF1-201ENST00000337665 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 PRDM1O75626 825 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 MORC3Q14149 939 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 IQCA1Q86XH1 822 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 SERTAD1Q9UHV2 236 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 CDK5RAP2Q96SN8 1893 aa16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
ARHGEF1-201ENST00000337665 KRT2P35908 639 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms