RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 PLIN2Q99541 437 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 NEMFO60524 1076 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 TXNRD3Q86VQ6 643 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 CCAR2Q8N163 923 aaKnown RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 MAPK8IP1Q9UQF2 711 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 NFE2L3Q9Y4A8 694 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 WDR19Q8NEZ3 1342 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 RAD21O60216 631 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 CRNKL1Q9BZJ0 848 aaKnown RBP11.12□□□□□ -0.63
MSL3-202ENST00000337339 VAT1LQ9HCJ6 419 aa11.12□□□□□ -0.63
MSL3-202ENST00000337339 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 KRT2P35908 639 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 PDE4BQ07343 736 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 DIXDC1Q155Q3 683 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 ARMCX5Q6P1M9 558 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 MTERF4Q7Z6M4 381 aaKnown RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 ZBTB9Q96C00 473 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 AK7Q96M32 723 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 CCNL1Q9UK58 526 aaPredicted RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 RFC4P35249 363 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 ADKP55263 362 aaKnown RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 CCZ1BP86790 482 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 CCZ1P86791 482 aaPredicted RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 UBE4AQ14139 1066 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 DYNLL2Q96FJ2 89 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 DNAI1Q9UI46 699 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 ZNF215Q9UL58 517 aaPredicted RBP11.11□□□□□ -0.63
MSL3-202ENST00000337339 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
MSL3-202ENST00000337339 CDC25BP30305 580 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 EARS2Q5JPH6 523 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
MSL3-202ENST00000337339 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 PARP4Q9UKK3 1724 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 CBFA2T2O43439 604 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 TFAP4Q01664 338 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 DHX8Q14562 1220 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 NCAPHQ15003 741 aa11.1□□□□□ -0.63
MSL3-202ENST00000337339 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
MSL3-202ENST00000337339 GOLGA8HP0CJ92 632 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 CPVLQ9H3G5 476 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 MAN1B1Q9UKM7 699 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 URI1O94763 535 aaPredicted RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 MAPKAPK5Q8IW41 473 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 FOXP1Q9H334 677 aaPredicted RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 ZNF804BA4D1E1 1349 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 PTGDRQ13258 359 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 TGFBRAP1Q8WUH2 860 aa11.09□□□□□ -0.63
MSL3-202ENST00000337339 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
MSL3-202ENST00000337339 RTL9Q8NET4 1388 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 PTPREP23469 700 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSL3-202ENST00000337339 AMOTL1Q8IY63 956 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
MSL3-202ENST00000337339 NSUN4Q96CB9 384 aaKnown RBP11.08□□□□□ -0.64
MSL3-202ENST00000337339 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
MSL3-202ENST00000337339 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
MSL3-202ENST00000337339 GLI3P10071 1580 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 UBAP1LF5GYI3 381 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 BMP6P22004 513 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 TIGD1Q96MW7 591 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
MSL3-202ENST00000337339 HPSEQ9Y251 543 aa11.08□□□□□ -0.64
MSL3-202ENST00000337339 WNT7AO00755 349 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 LDHBP07195 334 aaKnown RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 ELF2Q15723 593 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 TTC38Q5R3I4 469 aa11.07□□□□□ -0.64
MSL3-202ENST00000337339 E4F1Q66K89 784 aaPredicted RBP11.07□□□□□ -0.64
MSL3-202ENST00000337339 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms