RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IFNAR1P17181 557 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 AFMP43652 599 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 PDE4BQ07343 736 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 SEC23AQ15436 765 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 CNNM3Q8NE01 707 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 DPF2Q92785 391 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 EPSTI1Q96J88 318 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 TSPY2A6NKD2 308 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 GNAT2P19087 354 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 TM4SF1P30408 202 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 HSP90AA2PQ14568 343 aaPredicted RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 SMYD4Q8IYR2 804 aaPredicted RBP10.2□□□□□ -0.78
SNCA-201ENST00000336904 TGFBRAP1Q8WUH2 860 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 SERTAD1Q9UHV2 236 aa10.2□□□□□ -0.78
SNCA-201ENST00000336904 USP5P45974 858 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNCA-201ENST00000336904 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 FBXO33Q7Z6M2 555 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 CNBD1Q8NA66 436 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 MXD3Q9BW11 206 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 KCNH3Q9ULD8 1083 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 PCDHA5Q9Y5H7 936 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 DOCK2Q92608 1830 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 WDR19Q8NEZ3 1342 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 A0A1W2PQ27 194 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 A0A1W2PQ64 194 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 TRIM37O94972 964 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 CMA1P23946 247 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 U2AF2P26368 475 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNCA-201ENST00000336904 PKN1Q16512 942 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 KLHL10Q6JEL2 608 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 DHX58Q96C10 678 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 CSRNP2Q9H175 543 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 ZNF219Q9P2Y4 722 aaPredicted RBP10.19□□□□□ -0.78
SNCA-201ENST00000336904 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
SNCA-201ENST00000336904 CASZ1Q86V15 1759 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 ARAP2Q8WZ64 1704 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 A0A087X0B3 334 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 CTAGE5O15320 804 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 BMP6P22004 513 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 CLEC10AQ8IUN9 316 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
SNCA-201ENST00000336904 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 RNF41Q9H4P4 317 aaPredicted RBP10.18□□□□□ -0.78
SNCA-201ENST00000336904 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNCA-201ENST00000336904 V9GYY5 206 aaPredicted RBP10.18□□□□□ -0.78
SNCA-201ENST00000336904 PLCD1P51178 756 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 STX17P56962 302 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
SNCA-201ENST00000336904 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 CREBRFQ8IUR6 639 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 SEPT12Q8IYM1 358 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 UIMC1Q96RL1 719 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 PLIN2Q99541 437 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 STX8Q9UNK0 236 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 CNTNAP4Q9C0A0 1308 aa10.18□□□□□ -0.78
SNCA-201ENST00000336904 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 UFL1O94874 794 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 DEXIO95424 95 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 SKILP12757 684 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 EIF6P56537 245 aaKnown RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 GPSM2P81274 684 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 TFAP4Q01664 338 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 PIK3AP1Q6ZUJ8 805 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 BTAF1O14981 1849 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 TNRC6CQ9HCJ0 1690 aaKnown RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 AFF2P51816 1311 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 COL5A3P25940 1745 aaPredicted RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 TPM2P07951 284 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 CRNKL1Q9BZJ0 848 aaKnown RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 RTL9Q8NET4 1388 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 LAMB2P55268 1798 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 VWA3AA6NCI4 1184 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 MCM7P33993 719 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 TROAPQ12815 778 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 PICALMQ13492 652 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 NCAPHQ15003 741 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 RESP18Q5W5W9 173 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 PRR5LQ6MZQ0 368 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 VAT1LQ9HCJ6 419 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 FANCLQ9NW38 375 aa10.17□□□□□ -0.78
SNCA-201ENST00000336904 FBXO2Q9UK22 296 aaPredicted RBP10.17□□□□□ -0.78
SNCA-201ENST00000336904 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 LDHBP07195 334 aaKnown RBP10.16□□□□□ -0.78
SNCA-201ENST00000336904 HSPA1LP34931 641 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 NLRP12P59046 1061 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 MSL1Q68DK7 614 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 KRBA2Q6ZNG9 492 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms