RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 CHD4Q14839 1912 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 DOCK2Q92608 1830 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 FAM205CA6NFA0 338 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 CYP7A1P22680 504 aa20.39■□□□□ 0.85
IFFO1-201ENST00000336604 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
IFFO1-201ENST00000336604 hCG_1642624A0A1W2PR95 340 aa20.38■□□□□ 0.85
IFFO1-201ENST00000336604 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
IFFO1-201ENST00000336604 TNKSO95271 1327 aa20.38■□□□□ 0.85
IFFO1-201ENST00000336604 TMTC2Q8N394 836 aa20.38■□□□□ 0.85
IFFO1-201ENST00000336604 CSRNP2Q9H175 543 aa20.38■□□□□ 0.85
IFFO1-201ENST00000336604 RNF41Q9H4P4 317 aaPredicted RBP20.38■□□□□ 0.85
IFFO1-201ENST00000336604 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
IFFO1-201ENST00000336604 NT5DC1Q5TFE4 455 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 TRIM65Q6PJ69 517 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 TMEM139Q8IV31 216 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 SMARCE1Q969G3 411 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 MED15Q96RN5 788 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 NIP7Q9Y221 180 aaKnown RBP eCLIP20.37■□□□□ 0.85
IFFO1-201ENST00000336604 SARSP49591 514 aaKnown RBP20.37■□□□□ 0.85
IFFO1-201ENST00000336604 ELOA2Q8IYF1 753 aaPredicted RBP20.37■□□□□ 0.85
IFFO1-201ENST00000336604 VPS54Q9P1Q0 977 aa20.37■□□□□ 0.85
IFFO1-201ENST00000336604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.37■□□□□ 0.85
IFFO1-201ENST00000336604 SRPRBQ9Y5M8 271 aaKnown RBP20.37■□□□□ 0.85
IFFO1-201ENST00000336604 ACTN4O43707 911 aaKnown RBP20.36■□□□□ 0.85
IFFO1-201ENST00000336604 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 CDK11BP21127 795 aaKnown RBP20.36■□□□□ 0.85
IFFO1-201ENST00000336604 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 GYG1P46976 350 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 MORC3Q14149 939 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 SEC23AQ15436 765 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 REXO1L1PQ8IX06 675 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 ACSBG1Q96GR2 724 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
IFFO1-201ENST00000336604 CYP2D7A0A087X1C5 515 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 MYO1BO43795 1136 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 ZNF18P17022 549 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 EARS2Q5JPH6 523 aaKnown RBP20.35■□□□□ 0.85
IFFO1-201ENST00000336604 FAM177A1Q8N128 213 aaPredicted RBP20.35■□□□□ 0.85
IFFO1-201ENST00000336604 MLKLQ8NB16 471 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 SAMSN1Q9NSI8 373 aaKnown RBP20.35■□□□□ 0.85
IFFO1-201ENST00000336604 CCP110O43303 1012 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 PRDM1O75626 825 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 NTSR2O95665 410 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 ZNF579Q8NAF0 562 aaKnown RBP20.35■□□□□ 0.85
IFFO1-201ENST00000336604 ESR2Q92731 530 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 ZNF446Q9NWS9 450 aa20.35■□□□□ 0.85
IFFO1-201ENST00000336604 ADKP55263 362 aaKnown RBP20.34■□□□□ 0.85
IFFO1-201ENST00000336604 ENAHQ8N8S7 591 aaPredicted RBP20.34■□□□□ 0.85
IFFO1-201ENST00000336604 PHLPP2Q6ZVD8 1323 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 A0A087X0B3 334 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 MAGEB6P1A0A0J9YX57 407 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 CCDC66A2RUB6 948 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 TBX2Q13207 712 aaPredicted RBP20.34■□□□□ 0.85
IFFO1-201ENST00000336604 ENOX1Q8TC92 643 aaKnown RBP20.34■□□□□ 0.85
IFFO1-201ENST00000336604 EPSTI1Q96J88 318 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 NHSL1Q5SYE7 1610 aa20.34■□□□□ 0.85
IFFO1-201ENST00000336604 ARHGAP6O43182 974 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 TUBB4AP04350 444 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 IRX5P78411 483 aaPredicted RBP20.33■□□□□ 0.85
IFFO1-201ENST00000336604 PKN1Q16512 942 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 DHX58Q96C10 678 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 BAG1Q99933 345 aaPredicted RBP20.33■□□□□ 0.85
IFFO1-201ENST00000336604 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.85
IFFO1-201ENST00000336604 CEP131Q9UPN4 1083 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 PPP2R2CQ9Y2T4 447 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 COL4A1P02462 1669 aa20.33■□□□□ 0.85
IFFO1-201ENST00000336604 VWA3AA6NCI4 1184 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 WNT7AO00755 349 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 CASP1P29466 404 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 RCAN1P53805 252 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 AKAP17AQ02040 695 aaKnown RBP20.33■□□□□ 0.84
IFFO1-201ENST00000336604 PARP10Q53GL7 1025 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 SPECC1LQ69YQ0 1117 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 TC2NQ8N9U0 490 aa20.33■□□□□ 0.84
IFFO1-201ENST00000336604 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 ITPK1Q13572 414 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 TRERF1Q96PN7 1200 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 BCORQ6W2J9 1755 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 URI1O94763 535 aaPredicted RBP20.32■□□□□ 0.84
IFFO1-201ENST00000336604 AFMP43652 599 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 DYNLL1P63167 89 aaKnown RBP20.32■□□□□ 0.84
IFFO1-201ENST00000336604 SPATA20Q8TB22 786 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
IFFO1-201ENST00000336604 RIOK1Q9BRS2 568 aaKnown RBP20.32■□□□□ 0.84
IFFO1-201ENST00000336604 DACH1Q9UI36 760 aa20.32■□□□□ 0.84
IFFO1-201ENST00000336604 V9GY48 417 aaPredicted RBP20.32■□□□□ 0.84
IFFO1-201ENST00000336604 LOC102724428A0A0B4J2F2 783 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 SIK1P57059 783 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 ARHGAP29Q52LW3 1261 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 NOM1Q5C9Z4 860 aaKnown RBP20.31■□□□□ 0.84
IFFO1-201ENST00000336604 TOGARAM2Q6ZUX3 1019 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 NUTM2AQ8IVF1 878 aaPredicted RBP20.31■□□□□ 0.84
IFFO1-201ENST00000336604 BCL9LQ86UU0 1499 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 H2AFXP16104 143 aaPredicted RBP20.31■□□□□ 0.84
IFFO1-201ENST00000336604 FUT2Q10981 343 aa20.31■□□□□ 0.84
IFFO1-201ENST00000336604 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms