RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 CLUL1Q15846 466 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 STX1AQ16623 288 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 MFSD14BQ5SR56 506 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 RRAGBQ5VZM2 374 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 SPATA5Q8NB90 893 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 GSDMDP57764 484 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 APPBP2Q92624 585 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 CSRNP2Q9H175 543 aa8.26□□□□□ -1.09
EPHA3-201ENST00000336596 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
EPHA3-201ENST00000336596 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA6CA6NDK9 693 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA6BA6NDN3 693 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 MBD4O95243 580 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA6DP0CG33 693 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ATP2A2P16615 1042 aaKnown RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ARID4AP29374 1257 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 CUL4BQ13620 913 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 LIN9Q5TKA1 542 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 DTHD1Q6ZMT9 781 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA6AQ9NYA3 693 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 C3P01024 1663 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 DEXIO95424 95 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 FOSP01100 380 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 NASPP49321 788 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SSH3Q8TE77 659 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 NUP88Q99567 741 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SRP68Q9UHB9 627 aaKnown RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA8CPA6NN73 597 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 POLR2MP0CAP2 368 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SV2BQ7L1I2 683 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GOLGA5Q8TBA6 731 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ZNF830Q96NB3 372 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 PAGR1Q9BTK6 254 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 TBC1D2Q9BYX2 928 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 FSD2A1L4K1 749 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 KCNQ2O43526 872 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 FMNL1O95466 1100 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 PPP2R5AQ15172 486 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 CCDC183Q5T5S1 534 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 FERMT3Q86UX7 667 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 LUZP1Q86V48 1076 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 NCAPG2Q86XI2 1143 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GIMAP8Q8ND71 665 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SPAG5Q96R06 1193 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GREM2Q9H772 168 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 LRRC7Q96NW7 1537 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 TOP1P11387 765 aaKnown RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 MYCLP12524 364 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 GTF2IP78347 998 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ERFEQ4G0M1 354 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 FAM160B2Q86V87 743 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 NLRP10Q86W26 655 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ANKRD35Q8N283 1001 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SELENOOQ9BVL4 669 aa8.25□□□□□ -1.09
EPHA3-201ENST00000336596 SAP30BPQ9UHR5 308 aaKnown RBP8.25□□□□□ -1.09
EPHA3-201ENST00000336596 ASIC1P78348 528 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 BRF1Q92994 677 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 RNF34Q969K3 372 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 MRVI1Q9Y6F6 885 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 KIF13AQ9H1H9 1805 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 CHMLP26374 656 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 RAB11FIP4Q86YS3 637 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 RIOK1Q9BRS2 568 aaKnown RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 ZNF341Q9BYN7 854 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 INCENPQ9NQS7 918 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 FDX1P10109 184 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 POLR2BP30876 1174 aaKnown RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 GUCY1B3Q02153 619 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 ELMOD1Q8N336 334 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 IQCDQ96DY2 449 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 NT5C3AQ9H0P0 336 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 CACYBPQ9HB71 228 aaKnown RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 PFDN6O15212 129 aa8.24□□□□□ -1.09
EPHA3-201ENST00000336596 CYLC1P35663 651 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 CERKLQ49MI3 558 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 MAK16Q9BXY0 300 aaKnown RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 STMN4Q9H169 189 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-201ENST00000336596 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
EPHA3-201ENST00000336596 OTUD6BQ8N6M0 293 aa8.23□□□□□ -1.09
EPHA3-201ENST00000336596 TRIML1Q8N9V2 468 aa8.23□□□□□ -1.09
EPHA3-201ENST00000336596 RAB3IL1Q8TBN0 382 aa8.23□□□□□ -1.09
EPHA3-201ENST00000336596 TBC1D32Q96NH3 1257 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms