RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 HEG1Q9ULI3 1381 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 ATP1A3P13637 1013 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 ADKP55263 362 aaKnown RBP7.34□□□□□ -1.23
HMG20A-201ENST00000336216 TDRD12Q587J7 1177 aaKnown RBP7.34□□□□□ -1.23
HMG20A-201ENST00000336216 FAM196AQ6ZSG2 479 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 FNBP4Q8N3X1 1017 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-201ENST00000336216 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 SRRTQ9BXP5 876 aaKnown RBP7.34□□□□□ -1.23
HMG20A-201ENST00000336216 NYXQ9GZU5 481 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 MCAMP43121 646 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 NDUFA8P51970 172 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 MYSM1Q5VVJ2 828 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 CACNA2D4Q7Z3S7 1137 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 ZNF804AQ7Z570 1209 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 KRI1Q8N9T8 703 aaKnown RBP7.34□□□□□ -1.23
HMG20A-201ENST00000336216 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 GDAP1L1Q96MZ0 367 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 DSCC1Q9BVC3 393 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 PKD2L1Q9P0L9 805 aa7.34□□□□□ -1.23
HMG20A-201ENST00000336216 MYO1BO43795 1136 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 TRIM37O94972 964 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 PNMA6AP0CW24 399 aaPredicted RBP7.34□□□□□ -1.24
HMG20A-201ENST00000336216 ASIC1P78348 528 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 PNOCQ13519 176 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 SMC1AQ14683 1233 aaKnown RBP7.34□□□□□ -1.24
HMG20A-201ENST00000336216 DIXDC1Q155Q3 683 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 ZMYM1Q5SVZ6 1142 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 TXLNBQ8N3L3 684 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 BLZF1Q9H2G9 400 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 PIH1D3Q9NQM4 214 aaKnown RBP7.34□□□□□ -1.24
HMG20A-201ENST00000336216 DENND2AQ9ULE3 1009 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 PCDHA7Q9UN72 937 aa7.34□□□□□ -1.24
HMG20A-201ENST00000336216 MORC2Q9Y6X9 1032 aaPredicted RBP7.34□□□□□ -1.24
HMG20A-201ENST00000336216 PATL2C9JE40 543 aaKnown RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 H7C1W4 665 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 GNAT2P19087 354 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 ETF1P62495 437 aaKnown RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 PPP2R3AQ06190 1150 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 MTX1Q13505 466 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 RASGRF1Q13972 1273 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 ZSCAN26Q16670 478 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 LONRF3Q496Y0 759 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 LRRN4CLQ8ND94 238 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 VPS16Q9H269 839 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 GOLPH3LQ9H4A5 285 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 CRB1P82279 1406 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 TNKSO95271 1327 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 MARF1Q9Y4F3 1742 aaKnown RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 HLA-DOAP06340 250 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 SP4Q02446 784 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 NR5A1Q13285 461 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 MFSD14BQ5SR56 506 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 FKBP15Q5T1M5 1219 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 FCHSD1Q86WN1 690 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 ZNF654Q8IZM8 581 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 LCORLQ8N3X6 602 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 PLEKHA4Q9H4M7 779 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 ZSWIM5Q9P217 1185 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 H0YHG0 523 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 ERLIN1O75477 346 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 TRIM21P19474 475 aaKnown RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 KRT2P35908 639 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 PPARAQ07869 468 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 TOB2Q14106 344 aaPredicted RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 KIAA0825Q8IV33 1275 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 RASGRP4Q8TDF6 673 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 IPO4Q8TEX9 1081 aaKnown RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 TMEM87BQ96K49 555 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
HMG20A-201ENST00000336216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.33□□□□□ -1.24
HMG20A-201ENST00000336216 KIF5CO60282 957 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 EIF3JO75822 258 aaKnown RBP7.32□□□□□ -1.24
HMG20A-201ENST00000336216 USP8P40818 1118 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 TXKP42681 527 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 PLS1Q14651 629 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CCDC181Q5TID7 509 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 BRAPQ7Z569 592 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 NSUN7Q8NE18 718 aaKnown RBP7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CALML4Q96GE6 196 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 ZBTB21Q9ULJ3 1066 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 ELP1O95163 1332 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CALM1P0DP23 149 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CALM2P0DP24 149 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CALM3P0DP25 149 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 RBM6P78332 1123 aaKnown RBP7.32□□□□□ -1.24
HMG20A-201ENST00000336216 RESTQ13127 1097 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 TMEM266Q2M3C6 531 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 SLF2Q8IX21 1173 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 FANCBQ8NB91 859 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 FBXO18Q8NFZ0 1043 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 RUFY1Q96T51 708 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 CPVLQ9H3G5 476 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 MROH5Q6ZUA9 1318 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 PFKFB2O60825 505 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 APBA3O96018 575 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms