RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 HOOK3Q86VS8 718 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 AZI2Q9H6S1 392 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 UBXN1Q04323 297 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 CALCRLQ16602 461 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
C9orf47-201ENST00000334490 CUTAO60888 179 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 GTF3C6Q969F1 213 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 DYNLL1P63167 89 aaKnown RBP16.89■□□□□ 0.29
C9orf47-201ENST00000334490 MAEAQ7L5Y9 396 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 IFT74Q96LB3 600 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 RIMBP3CA6NJZ7 1639 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 RIMBP3BA6NNM3 1639 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 RIMBP3Q9UFD9 1639 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
C9orf47-201ENST00000334490 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 SKILP12757 684 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 TSPYL1Q9H0U9 437 aa16.89■□□□□ 0.29
C9orf47-201ENST00000334490 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
C9orf47-201ENST00000334490 H0YHG0 523 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 TTC16Q8NEE8 873 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 FRMD4BQ9Y2L6 1034 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
C9orf47-201ENST00000334490 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 NAA15Q9BXJ9 866 aaKnown RBP16.88■□□□□ 0.29
C9orf47-201ENST00000334490 DNM3Q9UQ16 869 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 MAPK8IP1Q9UQF2 711 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
C9orf47-201ENST00000334490 FLOT1O75955 427 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 BIRC3Q13489 604 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 HLTFQ14527 1009 aaKnown RBP eCLIP16.87■□□□□ 0.29
C9orf47-201ENST00000334490 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 FNBP1Q96RU3 617 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 C21orf2O43822 256 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
C9orf47-201ENST00000334490 HSPA1LP34931 641 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 LEO1Q8WVC0 666 aaPredicted RBP16.87■□□□□ 0.29
C9orf47-201ENST00000334490 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
C9orf47-201ENST00000334490 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 CRB1P82279 1406 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 ACTN2P35609 894 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 MYL5Q02045 173 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
C9orf47-201ENST00000334490 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 NLRX1Q86UT6 975 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 CCDC42Q96M95 316 aa16.87■□□□□ 0.29
C9orf47-201ENST00000334490 PCP11498 1178 aaKnown RBP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 DIXDC1Q155Q3 683 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 MAP4K1Q92918 833 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 GPR101Q96P66 508 aaPredicted RBP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ADRA2BP18089 450 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 PPP1R2P41236 205 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 PABPC4Q13310 644 aaKnown RBP eCLIP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ZRSR2Q15696 482 aaKnown RBP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 MAP9Q49MG5 647 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 CCDC113Q9H0I3 377 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 SASH1O94885 1247 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ADD2P35612 726 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
C9orf47-201ENST00000334490 ZBTB7AO95365 584 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 TAOK3Q9H2K8 898 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 COL15A1P39059 1388 aa16.86■□□□□ 0.29
C9orf47-201ENST00000334490 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
C9orf47-201ENST00000334490 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 FERMT1Q9BQL6 677 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 MRPL11Q9Y3B7 192 aaKnown RBP16.85■□□□□ 0.29
C9orf47-201ENST00000334490 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 SPICE1Q8N0Z3 855 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 ZSWIM4Q9H7M6 989 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 STK24Q9Y6E0 443 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 GAS7O60861 476 aa16.85■□□□□ 0.29
C9orf47-201ENST00000334490 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms