RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 SPP2Q13103 211 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 ARHGEF6Q15052 776 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 FBXO46Q6PJ61 603 aaPredicted RBP18.13■□□□□ 0.49
PFDN5-202ENST00000334478 OTOP1Q7RTM1 612 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 SMC5Q8IY18 1101 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 APPBP2Q92624 585 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 WDR18Q9BV38 432 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 PUS7LQ9H0K6 701 aaKnown RBP18.13■□□□□ 0.49
PFDN5-202ENST00000334478 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 ZSWIM8A7E2V4 1837 aa18.13■□□□□ 0.49
PFDN5-202ENST00000334478 HTTP42858 3142 aa18.12■□□□□ 0.49
PFDN5-202ENST00000334478 CHGBP05060 677 aa18.12■□□□□ 0.49
PFDN5-202ENST00000334478 PLCD1P51178 756 aa18.12■□□□□ 0.49
PFDN5-202ENST00000334478 AMOTL1Q8IY63 956 aa18.12■□□□□ 0.49
PFDN5-202ENST00000334478 TRIM17Q9Y577 477 aa18.12■□□□□ 0.49
PFDN5-202ENST00000334478 CCDC85CA6NKD9 419 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 RNF113AO15541 343 aaKnown RBP18.11■□□□□ 0.49
PFDN5-202ENST00000334478 SHMT1P34896 483 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 GABPAQ06546 454 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 KIF22Q14807 665 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
PFDN5-202ENST00000334478 SH3D19Q5HYK7 790 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 C17orf99Q6UX52 265 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 EFCC1Q9HA90 598 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 STAP2Q9UGK3 403 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 PNMA3Q9UL41 463 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 HPS5Q9UPZ3 1129 aa18.11■□□□□ 0.49
PFDN5-202ENST00000334478 PRKAB2O43741 272 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 GH2P01242 217 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 HMGCS2P54868 508 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 BACE1P56817 501 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 JAG1P78504 1218 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 LACTBP83111 547 aaPredicted RBP18.1■□□□□ 0.49
PFDN5-202ENST00000334478 PABPC4Q13310 644 aaKnown RBP eCLIP18.1■□□□□ 0.492e-11■■■■□ 23.3
PFDN5-202ENST00000334478 MTMR2Q13614 643 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
PFDN5-202ENST00000334478 C19orf81C9J6K1 198 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 USP17L10C9JJH3 530 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 GNRH1P01148 92 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 CYP2C8P10632 490 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 PDE1AP54750 535 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 SHROOM1Q2M3G4 852 aaPredicted RBP18.09■□□□□ 0.49
PFDN5-202ENST00000334478 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
PFDN5-202ENST00000334478 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
PFDN5-202ENST00000334478 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 CPA4Q9UI42 421 aa18.09■□□□□ 0.49
PFDN5-202ENST00000334478 GNAT2P19087 354 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 TREML2Q5T2D2 321 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 OSBP2Q969R2 916 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 TMOD4Q9NZQ9 345 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 ARPP21Q9UBL0 812 aaPredicted RBP18.08■□□□□ 0.48
PFDN5-202ENST00000334478 PTPN22Q9Y2R2 807 aa18.08■□□□□ 0.48
PFDN5-202ENST00000334478 RBBP6Q7Z6E9 1792 aaKnown RBP18.07■□□□□ 0.48
PFDN5-202ENST00000334478 IGHDP01880 384 aa18.07■□□□□ 0.48
PFDN5-202ENST00000334478 BCRP11274 1271 aa18.07■□□□□ 0.48
PFDN5-202ENST00000334478 C12orf60Q5U649 245 aa18.07■□□□□ 0.48
PFDN5-202ENST00000334478 EVI5LQ96CN4 794 aa18.07■□□□□ 0.48
PFDN5-202ENST00000334478 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
PFDN5-202ENST00000334478 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 USP17L21D6R901 530 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 GPAA1O43292 621 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 CYP2D6P10635 497 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 CAP1Q01518 475 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 NUCB1Q02818 461 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 EVX2Q03828 476 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 RAB3GAP1Q15042 981 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 CHD1LQ86WJ1 897 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 TICAM2Q86XR7 235 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 CENPFP49454 3210 aa18.06■□□□□ 0.48
PFDN5-202ENST00000334478 GREB1LQ9C091 1923 aaPredicted RBP18.06■□□□□ 0.48
PFDN5-202ENST00000334478 M0R2C6 588 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 OSBPP22059 807 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 PRMT2P55345 433 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 ZMYM1Q5SVZ6 1142 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 CTR9Q6PD62 1173 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 USP17L2Q6R6M4 530 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 C16orf86Q6ZW13 317 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 C12orf42Q96LP6 360 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 FEZ1Q99689 392 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 ARHGAP39Q9C0H5 1083 aa18.05■□□□□ 0.48
PFDN5-202ENST00000334478 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 GSG1L2A8MUP6 293 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
PFDN5-202ENST00000334478 HOXA7P31268 230 aaPredicted RBP18.04■□□□□ 0.48
PFDN5-202ENST00000334478 GCLCP48506 637 aaPredicted RBP18.04■□□□□ 0.48
PFDN5-202ENST00000334478 USP14P54578 494 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 SBK1Q52WX2 424 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 TMEM179Q6ZVK1 233 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 SLC44A5Q8NCS7 719 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 DYNLL2Q96FJ2 89 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 KIAA1683Q9H0B3 1180 aa18.04■□□□□ 0.48
PFDN5-202ENST00000334478 ASCC2Q9H1I8 757 aaPredicted RBP18.04■□□□□ 0.48
PFDN5-202ENST00000334478 CYP2D7A0A087X1C5 515 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms