RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 DNAJC18Q9H819 358 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 RNF181Q9P0P0 153 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 ZNF444Q8N0Y2 327 aaPredicted RBP27.28■■□□□ 1.96
TSEN54-201ENST00000333213 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
TSEN54-201ENST00000333213 SMC3Q9UQE7 1217 aa27.28■■□□□ 1.96
TSEN54-201ENST00000333213 CNTNAP1P78357 1384 aa27.27■■□□□ 1.96
TSEN54-201ENST00000333213 ATRNL1Q5VV63 1379 aa27.27■■□□□ 1.96
TSEN54-201ENST00000333213 JAK2O60674 1132 aa27.27■■□□□ 1.96
TSEN54-201ENST00000333213 GJB2P29033 226 aa27.27■■□□□ 1.96
TSEN54-201ENST00000333213 RBM26Q5T8P6 1007 aaKnown RBP27.27■■□□□ 1.96
TSEN54-201ENST00000333213 NFXL1Q6ZNB6 911 aa27.27■■□□□ 1.96
TSEN54-201ENST00000333213 ERICH2A1L162 156 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 SOCS7O14512 581 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 MMP14P50281 582 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 RCSD1Q6JBY9 416 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 GPC2Q8N158 579 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 EHD4Q9H223 541 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 SHMT1P34896 483 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 ZSCAN29Q8IWY8 852 aaPredicted RBP27.26■■□□□ 1.95
TSEN54-201ENST00000333213 ZNF287Q9HBT7 754 aa27.26■■□□□ 1.95
TSEN54-201ENST00000333213 CCDC69A6NI79 296 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 HLA-DOAP06340 250 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 MICU3Q86XE3 530 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 NSUN7Q8NE18 718 aaKnown RBP27.25■■□□□ 1.95
TSEN54-201ENST00000333213 VEZTQ9HBM0 779 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 TMOD2Q9NZR1 351 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 PI4KBQ9UBF8 816 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 ZDHHC9Q9Y397 364 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 SLC12A7Q9Y666 1083 aa27.25■■□□□ 1.95
TSEN54-201ENST00000333213 FAM196BA6NMK8 535 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 TSPY3P0CV98 308 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 TSPY8P0CW00 308 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 NT5C2P49902 561 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 TBC1D10BQ4KMP7 808 aaPredicted RBP27.24■■□□□ 1.95
TSEN54-201ENST00000333213 C9orf131Q5VYM1 1079 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 TMTC2Q8N394 836 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.24■■□□□ 1.95
TSEN54-201ENST00000333213 FAM217BQ9NTX9 383 aaPredicted RBP27.24■■□□□ 1.95
TSEN54-201ENST00000333213 SCAF8Q9UPN6 1271 aaKnown RBP27.24■■□□□ 1.95
TSEN54-201ENST00000333213 ZBTB43O43298 467 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 CDC27P30260 824 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 RAB3GAP1Q15042 981 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 CCDC144CPQ8IYA2 1237 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 SMARCC2Q8TAQ2 1214 aa27.24■■□□□ 1.95
TSEN54-201ENST00000333213 COL2A1P02458 1487 aaPredicted RBP27.24■■□□□ 1.95
TSEN54-201ENST00000333213 ASTN2O75129 1339 aaPredicted RBP27.23■■□□□ 1.95
TSEN54-201ENST00000333213 PPFIA3O75145 1194 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 IFIT1BQ5T764 474 aaKnown RBP27.23■■□□□ 1.95
TSEN54-201ENST00000333213 FKBP1CQ5VVH2 108 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 CDAN1Q8IWY9 1227 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 FAM151AQ8WW52 585 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 TCP11L1Q9NUJ3 509 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 GPRC5DQ9NZD1 345 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 SWAP70Q9UH65 585 aa27.23■■□□□ 1.95
TSEN54-201ENST00000333213 DDNO94850 711 aaPredicted RBP27.22■■□□□ 1.95
TSEN54-201ENST00000333213 ADD1P35611 737 aaKnown RBP27.22■■□□□ 1.95
TSEN54-201ENST00000333213 METAP2P50579 478 aaKnown RBP eCLIP27.22■■□□□ 1.95
TSEN54-201ENST00000333213 GPR162Q16538 588 aa27.22■■□□□ 1.95
TSEN54-201ENST00000333213 METTL16Q86W50 562 aaKnown RBP27.22■■□□□ 1.95
TSEN54-201ENST00000333213 ZNF654Q8IZM8 581 aa27.22■■□□□ 1.95
TSEN54-201ENST00000333213 NEDD1Q8NHV4 660 aa27.22■■□□□ 1.95
TSEN54-201ENST00000333213 MYO1BO43795 1136 aa27.22■■□□□ 1.95
TSEN54-201ENST00000333213 LLPHQ9BRT6 129 aaKnown RBP27.22■■□□□ 1.95
TSEN54-201ENST00000333213 AKR1B1P15121 316 aa27.21■■□□□ 1.95
TSEN54-201ENST00000333213 TMEM39BQ9GZU3 492 aa27.21■■□□□ 1.95
TSEN54-201ENST00000333213 PGAP2Q9UHJ9 254 aa27.21■■□□□ 1.95
TSEN54-201ENST00000333213 DDX11Q96FC9 970 aa27.2■■□□□ 1.95
TSEN54-201ENST00000333213 CSRNP1Q96S65 589 aa27.2■■□□□ 1.95
TSEN54-201ENST00000333213 NID2Q14112 1375 aa27.2■■□□□ 1.95
TSEN54-201ENST00000333213 SYT1P21579 422 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 EPS15P42566 896 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 TROAPQ12815 778 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 KIF4BQ2VIQ3 1234 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 FAM83AQ86UY5 434 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 DGKHQ86XP1 1220 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 FOXP4Q8IVH2 680 aaPredicted RBP27.2■■□□□ 1.94
TSEN54-201ENST00000333213 ANKS1AQ92625 1134 aa27.2■■□□□ 1.94
TSEN54-201ENST00000333213 PTPDC1A2A3K4 754 aa27.19■■□□□ 1.94
TSEN54-201ENST00000333213 CRACR2BQ8N4Y2 399 aaPredicted RBP27.19■■□□□ 1.94
TSEN54-201ENST00000333213 TRPM4Q8TD43 1214 aa27.19■■□□□ 1.94
TSEN54-201ENST00000333213 PLIN4Q96Q06 1357 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 GOLGA8AA7E2F4 631 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 FDPSP14324 419 aaKnown RBP27.18■■□□□ 1.94
TSEN54-201ENST00000333213 NUCB2P80303 420 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 NTRK3Q16288 839 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 TATDN1Q6P1N9 297 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 CEP95Q96GE4 821 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 MYH8P13535 1937 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 H7C1D1 291 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 NOVP48745 357 aa27.18■■□□□ 1.94
TSEN54-201ENST00000333213 SHROOM1Q2M3G4 852 aaPredicted RBP27.18■■□□□ 1.94
TSEN54-201ENST00000333213 TNPO1Q92973 898 aaKnown RBP27.18■■□□□ 1.94
TSEN54-201ENST00000333213 IGKV6D-41A0A0C4DH26 115 aa27.17■■□□□ 1.94
TSEN54-201ENST00000333213 BRD1O95696 1058 aa27.17■■□□□ 1.94
TSEN54-201ENST00000333213 SYNE3Q6ZMZ3 975 aa27.17■■□□□ 1.94
TSEN54-201ENST00000333213 NUP133Q8WUM0 1156 aa27.17■■□□□ 1.94
TSEN54-201ENST00000333213 RCAN1P53805 252 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 FANCBQ8NB91 859 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 HACL1Q9UJ83 578 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 HIRAP54198 1017 aaPredicted RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms