RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
SUMO3-201ENST00000332859 MKNK2Q9HBH9 465 aa23.46■■□□□ 1.35
SUMO3-201ENST00000332859 GDPD2Q9HCC8 539 aa23.46■■□□□ 1.35
SUMO3-201ENST00000332859 CDKL5O76039 1030 aa23.45■■□□□ 1.34
SUMO3-201ENST00000332859 RBM5P52756 815 aaKnown RBP eCLIP23.45■■□□□ 1.34
SUMO3-201ENST00000332859 ENAHQ8N8S7 591 aaPredicted RBP23.45■■□□□ 1.34
SUMO3-201ENST00000332859 BCS1LQ9Y276 419 aa23.45■■□□□ 1.34
SUMO3-201ENST00000332859 GADD45BO75293 160 aaPredicted RBP23.45■■□□□ 1.34
SUMO3-201ENST00000332859 VIL1P09327 827 aaKnown RBP23.45■■□□□ 1.34
SUMO3-201ENST00000332859 IFIT1BQ5T764 474 aaKnown RBP23.45■■□□□ 1.34
SUMO3-201ENST00000332859 C16orf86Q6ZW13 317 aa23.45■■□□□ 1.34
SUMO3-201ENST00000332859 ECM29Q5VYK3 1845 aa23.44■■□□□ 1.34
SUMO3-201ENST00000332859 RAD17O75943 681 aa23.44■■□□□ 1.34
SUMO3-201ENST00000332859 FAM47AQ5JRC9 791 aa23.44■■□□□ 1.34
SUMO3-201ENST00000332859 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
SUMO3-201ENST00000332859 ANP32BQ92688 251 aaKnown RBP23.44■■□□□ 1.34
SUMO3-201ENST00000332859 PSMD14O00487 310 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 RXRAP19793 462 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 ZNF654Q8IZM8 581 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 ZNF444Q8N0Y2 327 aaPredicted RBP23.43■■□□□ 1.34
SUMO3-201ENST00000332859 MYL10Q9BUA6 226 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 DDX4Q9NQI0 724 aaKnown RBP23.43■■□□□ 1.34
SUMO3-201ENST00000332859 TFAP4Q01664 338 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 CCDC178Q5BJE1 867 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 OSBPL5Q9H0X9 879 aaPredicted RBP23.43■■□□□ 1.34
SUMO3-201ENST00000332859 SPON1Q9HCB6 807 aa23.43■■□□□ 1.34
SUMO3-201ENST00000332859 SYCE3A1L190 88 aa23.42■■□□□ 1.34
SUMO3-201ENST00000332859 H3BQV1 296 aa23.42■■□□□ 1.34
SUMO3-201ENST00000332859 DNM1Q05193 864 aaKnown RBP23.42■■□□□ 1.34
SUMO3-201ENST00000332859 IFFO2Q5TF58 517 aa23.42■■□□□ 1.34
SUMO3-201ENST00000332859 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
SUMO3-201ENST00000332859 LTBP3Q9NS15 1303 aa23.42■■□□□ 1.34
SUMO3-201ENST00000332859 CCDC196A0A1B0GTZ2 297 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 NFKBIEO00221 500 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 LETM1O95202 739 aaPredicted RBP23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CDC27P30260 824 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 ADD1P35611 737 aaKnown RBP23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CDK8P49336 464 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 KRT85P78386 507 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CCDC173Q0VFZ6 552 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 RTN1Q16799 776 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CFAP100Q494V2 611 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CATIPQ7Z7H3 387 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 CCDC144CPQ8IYA2 1237 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 SLC44A5Q8NCS7 719 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 JDP2Q8WYK2 163 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 ORC3Q9UBD5 711 aaPredicted RBP23.41■■□□□ 1.34
SUMO3-201ENST00000332859 HDAC9Q9UKV0 1011 aa23.41■■□□□ 1.34
SUMO3-201ENST00000332859 FIBPO43427 364 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 TSPY3P0CV98 308 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 TSPY8P0CW00 308 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 PPP2R5BQ15173 497 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 IDI2Q9BXS1 227 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 MYH15Q9Y2K3 1946 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 CALM1P0DP23 149 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 CALM2P0DP24 149 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 CALM3P0DP25 149 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 FDPSP14324 419 aaKnown RBP23.4■■□□□ 1.34
SUMO3-201ENST00000332859 RASA1P20936 1047 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 CCDC183Q5T5S1 534 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 GMLQ99445 158 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 FAM217BQ9NTX9 383 aaPredicted RBP23.4■■□□□ 1.34
SUMO3-201ENST00000332859 TCP11L1Q9NUJ3 509 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 PCDHAC2Q9Y5I4 1007 aa23.4■■□□□ 1.34
SUMO3-201ENST00000332859 ELP1O95163 1332 aa23.39■■□□□ 1.34
SUMO3-201ENST00000332859 NPM3O75607 178 aaKnown RBP23.39■■□□□ 1.33
SUMO3-201ENST00000332859 DDAH1O94760 285 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 HLA-DOAP06340 250 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 AGBL3Q8NEM8 1001 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 NLGN2Q8NFZ4 835 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 NUP133Q8WUM0 1156 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 PPP1R9BQ96SB3 815 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 RBSNQ9H1K0 784 aa23.39■■□□□ 1.33
SUMO3-201ENST00000332859 ARFGEF1Q9Y6D6 1849 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 NMT2O60551 498 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 NFIAQ12857 509 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 DGKHQ86XP1 1220 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 FANCBQ8NB91 859 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 PPFIA3O75145 1194 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 NTRK3Q16288 839 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 OGFOD1Q8N543 542 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 SWAP70Q9UH65 585 aa23.38■■□□□ 1.33
SUMO3-201ENST00000332859 IFNAR1P17181 557 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 GABPAQ06546 454 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 CXCL9Q07325 125 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 CIAPIN1Q6FI81 312 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 ANKS1AQ92625 1134 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 STK36Q9NRP7 1315 aa23.37■■□□□ 1.33
SUMO3-201ENST00000332859 RGS22Q8NE09 1264 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 SCAND2PQ9GZW5 306 aaPredicted RBP23.36■■□□□ 1.33
SUMO3-201ENST00000332859 DHX36Q9H2U1 1008 aaKnown RBP23.36■■□□□ 1.33
SUMO3-201ENST00000332859 TSPY26PQ9H489 355 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 ZSCAN16Q9H4T2 348 aaPredicted RBP23.36■■□□□ 1.33
SUMO3-201ENST00000332859 IL17RBQ9NRM6 502 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 RBM28Q9NW13 759 aaKnown RBP23.36■■□□□ 1.33
SUMO3-201ENST00000332859 SERPINB13Q9UIV8 391 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 SSRP1Q08945 709 aaKnown RBP23.36■■□□□ 1.33
SUMO3-201ENST00000332859 TNIP1Q15025 636 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 RCSD1Q6JBY9 416 aa23.36■■□□□ 1.33
SUMO3-201ENST00000332859 NEDD1Q8NHV4 660 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms