RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 MFAP1P55081 439 aaKnown RBP19.59■□□□□ 0.73
C11orf88-201ENST00000332814 ABCB5Q2M3G0 1257 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 MCMDC2Q4G0Z9 681 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 C12orf60Q5U649 245 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 TATDN1Q6P1N9 297 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 CTR9Q6PD62 1173 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
C11orf88-201ENST00000332814 NAPBQ9H115 298 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
C11orf88-201ENST00000332814 ZBTB21Q9ULJ3 1066 aa19.59■□□□□ 0.73
C11orf88-201ENST00000332814 MINDY4BA8MYZ0 360 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 MPHOSPH10O00566 681 aaKnown RBP19.58■□□□□ 0.72
C11orf88-201ENST00000332814 TBC1D8O95759 1140 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 GH2P01242 217 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 SDSP20132 328 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 NMIQ13287 307 aaPredicted RBP19.58■□□□□ 0.72
C11orf88-201ENST00000332814 RRP1BQ14684 758 aaKnown RBP19.58■□□□□ 0.72
C11orf88-201ENST00000332814 CCDC129Q6ZRS4 1044 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 FASTKD5Q7L8L6 764 aaKnown RBP19.58■□□□□ 0.72
C11orf88-201ENST00000332814 ZNF280CQ8ND82 737 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 FAM227BQ96M60 508 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 AFG3L2Q9Y4W6 797 aa19.58■□□□□ 0.72
C11orf88-201ENST00000332814 LAMB1P07942 1786 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 CYP2D7A0A087X1C5 515 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 A0A0D9SFI3 127 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 SHMT1P34896 483 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 GABPAQ06546 454 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 SPP2Q13103 211 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 TAF1CQ15572 869 aaPredicted RBP19.57■□□□□ 0.72
C11orf88-201ENST00000332814 SBK1Q52WX2 424 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 GADL1Q6ZQY3 521 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 IFNL3Q8IZI9 196 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 DYNLL2Q96FJ2 89 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 PTPN18Q99952 460 aa19.57■□□□□ 0.72
C11orf88-201ENST00000332814 ZCCHC17Q9NP64 241 aaKnown RBP19.57■□□□□ 0.72
C11orf88-201ENST00000332814 A0A0G2JLL6 359 aaPredicted RBP19.56■□□□□ 0.72
C11orf88-201ENST00000332814 SLC3A2P08195 630 aaKnown RBP19.56■□□□□ 0.72
C11orf88-201ENST00000332814 RAB3GAP1Q15042 981 aa19.56■□□□□ 0.72
C11orf88-201ENST00000332814 PRRT2Q7Z6L0 340 aaPredicted RBP19.56■□□□□ 0.72
C11orf88-201ENST00000332814 ANKRD23Q86SG2 305 aa19.56■□□□□ 0.72
C11orf88-201ENST00000332814 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
C11orf88-201ENST00000332814 ZNF287Q9HBT7 754 aa19.56■□□□□ 0.72
C11orf88-201ENST00000332814 ZFYVE28Q9HCC9 887 aa19.56■□□□□ 0.72
C11orf88-201ENST00000332814 EPB41L4AQ9HCS5 686 aaPredicted RBP19.56■□□□□ 0.72
C11orf88-201ENST00000332814 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 CCDC171Q6TFL3 1326 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 GSPT1P15170 499 aaKnown RBP19.55■□□□□ 0.72
C11orf88-201ENST00000332814 EVX2Q03828 476 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
C11orf88-201ENST00000332814 C16orf86Q6ZW13 317 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 SLC44A5Q8NCS7 719 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 FEZ1Q99689 392 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 CFHR5Q9BXR6 569 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
C11orf88-201ENST00000332814 PDHXO00330 501 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 CDK8P49336 464 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 CRHR2Q13324 411 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 CCDC17Q96LX7 622 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 WDR18Q9BV38 432 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 MKNK2Q9HBH9 465 aa19.54■□□□□ 0.72
C11orf88-201ENST00000332814 GPR25O00155 361 aa19.53■□□□□ 0.72
C11orf88-201ENST00000332814 HMGCS2P54868 508 aa19.53■□□□□ 0.72
C11orf88-201ENST00000332814 MTMR2Q13614 643 aa19.53■□□□□ 0.72
C11orf88-201ENST00000332814 SHROOM1Q2M3G4 852 aaPredicted RBP19.53■□□□□ 0.72
C11orf88-201ENST00000332814 TMEM179Q6ZVK1 233 aa19.53■□□□□ 0.72
C11orf88-201ENST00000332814 PROCA1Q8NCQ7 364 aaPredicted RBP19.53■□□□□ 0.72
C11orf88-201ENST00000332814 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
C11orf88-201ENST00000332814 BAZ2AQ9UIF9 1905 aaKnown RBP19.53■□□□□ 0.72
C11orf88-201ENST00000332814 C19orf81C9J6K1 198 aa19.52■□□□□ 0.72
C11orf88-201ENST00000332814 USP17L10C9JJH3 530 aa19.52■□□□□ 0.72
C11orf88-201ENST00000332814 JAG1P78504 1218 aa19.52■□□□□ 0.72
C11orf88-201ENST00000332814 PABPC4Q13310 644 aaKnown RBP eCLIP19.52■□□□□ 0.72
C11orf88-201ENST00000332814 RUFY2Q8WXA3 655 aa19.52■□□□□ 0.72
C11orf88-201ENST00000332814 ROBO3Q96MS0 1386 aa19.52■□□□□ 0.72
C11orf88-201ENST00000332814 FKTNO75072 461 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 BACE1P56817 501 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 PDE4BQ07343 736 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 PPARAQ07869 468 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
C11orf88-201ENST00000332814 COL13A1Q5TAT6 717 aaPredicted RBP19.51■□□□□ 0.71
C11orf88-201ENST00000332814 VPS53Q5VIR6 699 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 ZNF589Q86UQ0 364 aaPredicted RBP19.51■□□□□ 0.71
C11orf88-201ENST00000332814 PNMA3Q9UL41 463 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 AGTPBP1Q9UPW5 1226 aa19.51■□□□□ 0.71
C11orf88-201ENST00000332814 AKR1B1P15121 316 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 USP14P54578 494 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 SEPT2Q15019 361 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 USP17L2Q6R6M4 530 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
C11orf88-201ENST00000332814 ZNF296Q8WUU4 475 aaPredicted RBP19.5■□□□□ 0.71
C11orf88-201ENST00000332814 PPP4R2Q9NY27 417 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 RAD50Q92878 1312 aa19.5■□□□□ 0.71
C11orf88-201ENST00000332814 SMIM22K7EJ46 135 aa19.49■□□□□ 0.71
C11orf88-201ENST00000332814 HSPD1P10809 573 aaKnown RBP19.49■□□□□ 0.71
C11orf88-201ENST00000332814 ICA1Q05084 483 aa19.49■□□□□ 0.71
C11orf88-201ENST00000332814 MOGSQ13724 837 aa19.49■□□□□ 0.71
C11orf88-201ENST00000332814 ZYXQ15942 572 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms