RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DPCR1Q3MIW9 517 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 RINLQ6ZS11 566 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 RBM12BQ8IXT5 1001 aaKnown RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 FUKQ8N0W3 1084 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 RBM8AQ9Y5S9 174 aaKnown RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 GOLGA6L9A6NEM1 432 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 H7C1W4 665 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 GCP02774 474 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 FESP07332 822 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 POLD1P28340 1107 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 DPF2Q92785 391 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 GPATCH3Q96I76 525 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
SHMT2-201ENST00000328923 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-201ENST00000328923 JCADQ9P266 1359 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 AHCYL1O43865 530 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 KIF4AO95239 1232 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-201ENST00000328923 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-201ENST00000328923 FANCCQ00597 558 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 POTEAQ6S8J7 498 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 CCDC50Q8IVM0 306 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 USHBP1Q8N6Y0 703 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 DDX54Q8TDD1 881 aaKnown RBP13.36□□□□□ -0.27
SHMT2-201ENST00000328923 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
SHMT2-201ENST00000328923 RGL1Q9NZL6 768 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 COL16A1Q07092 1604 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-201ENST00000328923 RGPD2P0DJD1 1756 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 A0A1B0GVG6 124 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 OPLAHO14841 1288 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 SLC8A1P32418 973 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 PDCLQ13371 301 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 RASSF8Q8NHQ8 419 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 CCDC114Q96M63 670 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 HAUS2Q9NVX0 235 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 HMG20BQ9P0W2 317 aa13.36□□□□□ -0.27
SHMT2-201ENST00000328923 MYL1P05976 194 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 RPS6KB1P23443 525 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 CD151P48509 253 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 ZBED6P86452 979 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 SPATS2Q86XZ4 545 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 ARHGEF1Q92888 912 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 PES1O00541 588 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 SLC27A2O14975 620 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 TPD52L2O43399 206 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 MYO1BO43795 1136 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
SHMT2-201ENST00000328923 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 MFSD4BQ5TF39 518 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 ACRBPQ8NEB7 543 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 FAM81AQ8TBF8 368 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 COG1Q8WTW3 980 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
SHMT2-201ENST00000328923 A0A0U1RQJ8 604 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 TMEM232C9JQI7 657 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 BIN1O00499 593 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 MYBL1P10243 752 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 SCNN1BP51168 640 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 IFT88Q13099 833 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 MTX1Q13505 466 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 MICALCLQ6ZW33 695 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 ATRIPQ8WXE1 791 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 SPAG5Q96R06 1193 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 SH3GL2Q99962 352 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 LZTFL1Q9NQ48 299 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 PXDNQ92626 1479 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 PFKFB2O60825 505 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-201ENST00000328923 AKAP17AQ02040 695 aaKnown RBP13.34□□□□□ -0.27
SHMT2-201ENST00000328923 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
SHMT2-201ENST00000328923 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms