RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 TNNT1P13805 278 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 DCP1AQ9NPI6 582 aaPredicted RBP12.24□□□□□ -0.45
CUL4A-201ENST00000326335 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 AFF2P51816 1311 aa12.24□□□□□ -0.45
CUL4A-201ENST00000326335 FAM170AA1A519 330 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 PLCD1P51178 756 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 BRAPQ7Z569 592 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 DHX40Q8IX18 779 aaKnown RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 DPF2Q92785 391 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 CSRNP2Q9H175 543 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 ITGB4P16144 1822 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 SLC39A14Q15043 492 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 RIOK1Q9BRS2 568 aaKnown RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 NAT10Q9H0A0 1025 aaKnown RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 TJP1Q07157 1748 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 RFX7Q2KHR2 1363 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 TMEM232C9JQI7 657 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 RPS6KA4O75676 772 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 TOB1P50616 345 aaPredicted RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 IQCB1Q15051 598 aa12.23□□□□□ -0.45
CUL4A-201ENST00000326335 ZNF444Q8N0Y2 327 aaPredicted RBP12.23□□□□□ -0.45
CUL4A-201ENST00000326335 MFSD14BQ5SR56 506 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 KAT14Q9H8E8 782 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 DISP2A7MBM2 1401 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 RIOK3O14730 519 aaKnown RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 JMYQ8N9B5 988 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 KRI1Q8N9T8 703 aaKnown RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 NUP98P52948 1817 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 IGSF3O75054 1194 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 PDE4BQ07343 736 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 FOXP4Q8IVH2 680 aaPredicted RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 POLR3EQ9NVU0 708 aa12.22□□□□□ -0.45
CUL4A-201ENST00000326335 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
CUL4A-201ENST00000326335 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 MMP1P03956 469 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 GPSM2P81274 684 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.45
CUL4A-201ENST00000326335 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 SRBD1Q8N5C6 995 aaKnown RBP12.21□□□□□ -0.45
CUL4A-201ENST00000326335 ADAMTS7Q9UKP4 1686 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
CUL4A-201ENST00000326335 SERPINB2P05120 415 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 GNAT2P19087 354 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.45
CUL4A-201ENST00000326335 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 STAG1Q8WVM7 1258 aa12.21□□□□□ -0.45
CUL4A-201ENST00000326335 DEXIO95424 95 aa12.21□□□□□ -0.46
CUL4A-201ENST00000326335 YEATS4O95619 227 aa12.21□□□□□ -0.46
CUL4A-201ENST00000326335 UBASH3AP57075 661 aa12.21□□□□□ -0.46
CUL4A-201ENST00000326335 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.46
CUL4A-201ENST00000326335 SHISA4Q96DD7 197 aa12.21□□□□□ -0.46
CUL4A-201ENST00000326335 NYXQ9GZU5 481 aa12.21□□□□□ -0.46
CUL4A-201ENST00000326335 PPP1R1BQ9UD71 204 aaPredicted RBP12.21□□□□□ -0.46
CUL4A-201ENST00000326335 COL1A1P02452 1464 aaPredicted RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 IFNAR1P17181 557 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 TRMT1LQ7Z2T5 733 aaKnown RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 TEX11Q8IYF3 940 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 BAZ2AQ9UIF9 1905 aaKnown RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 CTAGE5O15320 804 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 XBP1P17861 261 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 BTDP43251 543 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 HS1BP3Q53T59 392 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 TDRD7Q8NHU6 1098 aaKnown RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 PCDHAC2Q9Y5I4 1007 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 LAMA4Q16363 1823 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 ADKP55263 362 aaKnown RBP12.2□□□□□ -0.46
CUL4A-201ENST00000326335 PTGDRQ13258 359 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 PNMA1Q8ND90 353 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 GJA10Q969M2 543 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 KCNQ5Q9NR82 932 aa12.2□□□□□ -0.46
CUL4A-201ENST00000326335 CMA1P23946 247 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 CCT6AP40227 531 aaKnown RBP12.19□□□□□ -0.46
CUL4A-201ENST00000326335 LIFRP42702 1097 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 TPM4P67936 248 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
CUL4A-201ENST00000326335 DOT1LQ8TEK3 1739 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 FANCCQ00597 558 aa12.19□□□□□ -0.46
CUL4A-201ENST00000326335 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
CUL4A-201ENST00000326335 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms