RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
PPM1A-202ENST00000325658 JADE2Q9NQC1 790 aa12.14□□□□□ -0.47
PPM1A-202ENST00000325658 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
PPM1A-202ENST00000325658 CEP131Q9UPN4 1083 aa12.14□□□□□ -0.47
PPM1A-202ENST00000325658 CRB1P82279 1406 aa12.14□□□□□ -0.47
PPM1A-202ENST00000325658 ADCY9O60503 1353 aa12.14□□□□□ -0.47
PPM1A-202ENST00000325658 ANKRD62A6NC57 917 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 BUB1BO60566 1050 aaPredicted RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 NDUFA8P51970 172 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 SCRN1Q12765 414 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 SPECC1LQ69YQ0 1117 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 WDR24Q96S15 920 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 ODF2LQ9ULJ1 636 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 CPS1P31327 1500 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 BAG3O95817 575 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 CCDC178Q5BJE1 867 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 MAP4K1Q92918 833 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 IFT172Q9UG01 1749 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 PDE8AO60658 829 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 CCDC6Q16204 474 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 TCERG1LQ5VWI1 586 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 RBM43Q6ZSC3 357 aaKnown RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 COBLO75128 1261 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 TBC1D8O95759 1140 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 PTPN12Q05209 780 aaKnown RBP12.13□□□□□ -0.47
PPM1A-202ENST00000325658 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
PPM1A-202ENST00000325658 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 H3BQF6 201 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 OPA1O60313 960 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 N4BP2L2Q92802 583 aaPredicted RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 GDAP1L1Q96MZ0 367 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 KRT23Q9C075 422 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 PPLO60437 1756 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 CCDC160A6NGH7 325 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 HLFQ16534 295 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 DIS3L2Q8IYB7 885 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 PRKAB2O43741 272 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 MTIF2P46199 727 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
PPM1A-202ENST00000325658 ANGEL1Q9UNK9 670 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 CPSF1Q10570 1443 aaKnown RBP12.12□□□□□ -0.47
PPM1A-202ENST00000325658 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 USP17L21D6R901 530 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 PUM3Q15397 648 aaKnown RBP12.11□□□□□ -0.47
PPM1A-202ENST00000325658 FKBP15Q5T1M5 1219 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 TRMT44Q8IYL2 757 aaKnown RBP12.11□□□□□ -0.47
PPM1A-202ENST00000325658 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 SUDS3Q9H7L9 328 aaPredicted RBP12.11□□□□□ -0.47
PPM1A-202ENST00000325658 ADAM21Q9UKJ8 722 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 ATP7BP35670 1465 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 PCK1P35558 622 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 CCT5P48643 541 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 ARID5AQ03989 594 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 SF3A3Q12874 501 aaKnown RBP eCLIP12.11□□□□□ -0.475e-7■■■□□ 14.8
PPM1A-202ENST00000325658 E2F5Q15329 346 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 CCDC93Q567U6 631 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 TDRD12Q587J7 1177 aaKnown RBP12.11□□□□□ -0.47
PPM1A-202ENST00000325658 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 MAPKAPK5Q8IW41 473 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 PIGBQ92521 554 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 TACO1Q9BSH4 297 aaKnown RBP12.11□□□□□ -0.47
PPM1A-202ENST00000325658 L2HGDHQ9H9P8 463 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 GOLGA6CA6NDK9 693 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 GOLGA6DP0CG33 693 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 TCP10Q12799 353 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 POLA2Q14181 598 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 NEDD9Q14511 834 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 GOLGA6AQ9NYA3 693 aa12.11□□□□□ -0.47
PPM1A-202ENST00000325658 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
PPM1A-202ENST00000325658 POLR2DO15514 142 aaKnown RBP12.1□□□□□ -0.47
PPM1A-202ENST00000325658 TNNI2P48788 182 aa12.1□□□□□ -0.47
PPM1A-202ENST00000325658 NAPAP54920 295 aa12.1□□□□□ -0.47
PPM1A-202ENST00000325658 ADKP55263 362 aaKnown RBP12.1□□□□□ -0.47
PPM1A-202ENST00000325658 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
PPM1A-202ENST00000325658 KRT40Q6A162 431 aa12.1□□□□□ -0.47
PPM1A-202ENST00000325658 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms