RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 NOVP48745 357 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
NCL-201ENST00000322723 STK38Q15208 465 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 SPATA20Q8TB22 786 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 SDR42E1Q8WUS8 393 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 ESR2Q92731 530 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 SETDB2Q96T68 719 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
NCL-201ENST00000322723 IKBKBO14920 756 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 RXRAP19793 462 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
NCL-201ENST00000322723 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 ADAMTSL1Q8N6G6 1762 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 CCDC196A0A1B0GTZ2 297 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 PTPREP23469 700 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 PPP4CP60510 307 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 GRAPQ13588 217 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 GRAPLQ8TC17 118 aaPredicted RBP13.84□□□□□ -0.19
NCL-201ENST00000322723 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 SARSP49591 514 aaKnown RBP13.84□□□□□ -0.19
NCL-201ENST00000322723 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
NCL-201ENST00000322723 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
NCL-201ENST00000322723 USP21Q9UK80 565 aa13.84□□□□□ -0.19
NCL-201ENST00000322723 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.19
NCL-201ENST00000322723 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.19
NCL-201ENST00000322723 OSBPL5Q9H0X9 879 aaPredicted RBP13.83□□□□□ -0.19
NCL-201ENST00000322723 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.19
NCL-201ENST00000322723 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 HIBADHP31937 336 aaKnown RBP13.83□□□□□ -0.2
NCL-201ENST00000322723 SART3Q15020 963 aaKnown RBP13.83□□□□□ -0.2
NCL-201ENST00000322723 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 ARPP21Q9UBL0 812 aaPredicted RBP13.83□□□□□ -0.2
NCL-201ENST00000322723 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
NCL-201ENST00000322723 KCNQ4P56696 695 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
NCL-201ENST00000322723 GNPATO15228 680 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 MYO1BO43795 1136 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 LRRC4BQ9NT99 713 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 CALM1P0DP23 149 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 CALM2P0DP24 149 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 CALM3P0DP25 149 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 SMIM5Q71RC9 77 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
NCL-201ENST00000322723 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
NCL-201ENST00000322723 SLC26A6Q9BXS9 759 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
NCL-201ENST00000322723 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
NCL-201ENST00000322723 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 IL1R1P14778 569 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 NFIXQ14938 502 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 JMYQ8N9B5 988 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 HOXA10P31260 410 aaPredicted RBP13.81□□□□□ -0.2
NCL-201ENST00000322723 FAM177A1Q8N128 213 aaPredicted RBP13.81□□□□□ -0.2
NCL-201ENST00000322723 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
NCL-201ENST00000322723 M0R2N6 131 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 PTGS1P23219 599 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 KCNJ6P48051 423 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 RAI14Q9P0K7 980 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 PLIN4Q96Q06 1357 aa13.81□□□□□ -0.2
NCL-201ENST00000322723 EVX2Q03828 476 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
NCL-201ENST00000322723 DIS3L2Q8IYB7 885 aaKnown RBP13.8□□□□□ -0.2
NCL-201ENST00000322723 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 BTBD18B2RXH4 712 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 ZPR1O75312 459 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 KRBA2Q6ZNG9 492 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 MYRIPQ8NFW9 859 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 NRBP1Q9UHY1 535 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 XDHP47989 1333 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 NEMFO60524 1076 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 PRDX5P30044 214 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
NCL-201ENST00000322723 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
NCL-201ENST00000322723 ZKSCAN3Q9BRR0 538 aa13.8□□□□□ -0.2
NCL-201ENST00000322723 CCZ1BP86790 482 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 CCZ1P86791 482 aaPredicted RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
NCL-201ENST00000322723 BMP6P22004 513 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 PRR5LQ6MZQ0 368 aa13.79□□□□□ -0.2
NCL-201ENST00000322723 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms