RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ATP6V0A2Q9Y487 856 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TLK2Q86UE8 772 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 RHPN1Q8TCX5 695 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 MED4Q9NPJ6 270 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TEKT2Q9UIF3 430 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 PARD3Q8TEW0 1356 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 KRT8P05787 483 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 SMTNP53814 917 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 STX3Q13277 289 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 FCHSD1Q86WN1 690 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 OLFM3Q96PB7 478 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 DDX21Q9NR30 783 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 EIF3DO15371 548 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ASIC1P78348 528 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 SYCE1Q8N0S2 351 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TMEM191CA6NGB0 347 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TMEM191BP0C7N4 346 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ATP2B3Q16720 1220 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 PNMA8AQ86V59 439 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 HARSP12081 509 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ZNF449Q6P9G9 518 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ZC3H15Q8WU90 426 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 CFAP36Q96G28 342 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 WBP4O75554 376 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TYRO3Q06418 890 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 UHRF1BP1LA0JNW5 1464 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 KLF18A0A0U1RQI7 1052 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 HCLS1P14317 486 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 PSPC1Q8WXF1 523 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 PUF60Q9UHX1 559 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 XPOTO43592 962 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 HOXB7P09629 217 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 ACRBPQ8NEB7 543 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
COL12A1-201ENST00000322507 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
COL12A1-201ENST00000322507 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 ZMYM4Q5VZL5 1548 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 RAB3GAP1Q15042 981 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 ORC6Q9Y5N6 252 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 PDE1AP54750 535 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 PRAG1Q86YV5 1406 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 FLOT1O75955 427 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 NAPAP54920 295 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 KRT4P19013 534 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 TSC22D1Q15714 1073 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 DHX32Q7L7V1 743 aaKnown RBP10.74□□□□□ -0.69
COL12A1-201ENST00000322507 EPB41P11171 864 aaKnown RBP10.74□□□□□ -0.69
COL12A1-201ENST00000322507 MRPL28Q13084 256 aaKnown RBP10.74□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC25Q86WR0 208 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 LGSNQ5TDP6 509 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC89Q8N998 374 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 EXOC7Q9UPT5 735 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 UTP11Q9Y3A2 253 aaKnown RBP10.74□□□□□ -0.69
COL12A1-201ENST00000322507 GOLGA8QA0A0J9YX86 632 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 GOLGA8OA6NCC3 632 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 GOLGA8NF8WBI6 632 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 PRDM1O75626 825 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 IFT20Q8IY31 132 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 KRT10P13645 584 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 TXLNGQ9NUQ3 528 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 DCDC2Q9UHG0 476 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
COL12A1-201ENST00000322507 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 ZNF653Q96CK0 615 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 SDSP20132 328 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 LMNB1P20700 586 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MYRIPQ8NFW9 859 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 CHMP6Q96FZ7 201 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PAG1Q9NWQ8 432 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 DNAI1Q9UI46 699 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 ESYT2A0FGR8 921 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 RFC4P35249 363 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PI4KAP1Q8N8J0 262 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MMS22LQ6ZRQ5 1243 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 STMN3Q9NZ72 180 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 ESRRBO95718 433 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 CA8P35219 290 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 MPRIPQ6WCQ1 1025 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 CCDC84Q86UT8 332 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-201ENST00000322507 CPLX3Q8WVH0 158 aa10.73□□□□□ -0.69
COL12A1-201ENST00000322507 PARP2Q9UGN5 583 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms