RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 FSD2A1L4K1 749 aa30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 GOLGA6L3A6NEY3 463 aa30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 IFNAR1P17181 557 aa30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 SSRP1Q08945 709 aaKnown RBP30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 APOBEC3HQ6NTF7 200 aaKnown RBP30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 LEO1Q8WVC0 666 aaPredicted RBP30.71■■■□□ 2.51
TM6SF1-202ENST00000322019 KIF28PB7ZC32 967 aa30.7■■■□□ 2.51
TM6SF1-202ENST00000322019 CRKP46108 304 aa30.7■■■□□ 2.51
TM6SF1-202ENST00000322019 TROAPQ12815 778 aa30.7■■■□□ 2.51
TM6SF1-202ENST00000322019 RCSD1Q6JBY9 416 aa30.7■■■□□ 2.51
TM6SF1-202ENST00000322019 NBPF11Q86T75 865 aa30.7■■■□□ 2.51
TM6SF1-202ENST00000322019 FMNL1O95466 1100 aaPredicted RBP30.7■■■□□ 2.5
TM6SF1-202ENST00000322019 CDC42EP5Q6NZY7 148 aa30.7■■■□□ 2.5
TM6SF1-202ENST00000322019 CCDC125Q86Z20 511 aa30.7■■■□□ 2.5
TM6SF1-202ENST00000322019 RASA1P20936 1047 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 R3HDM1Q15032 1099 aaKnown RBP30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 CC2D2BQ6DHV5 1058 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 ZNF277Q9NRM2 450 aaPredicted RBP30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 PPP1R1BQ9UD71 204 aaPredicted RBP30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 MYH1P12882 1939 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 PLEKHA8P1O95397 391 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 CDK8P49336 464 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 CACNB3P54284 484 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 CSPP1Q1MSJ5 1256 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 CCDC93Q567U6 631 aa30.69■■■□□ 2.5
TM6SF1-202ENST00000322019 ZNF646O15015 1829 aaPredicted RBP30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 hCG_1642624A0A1W2PR95 340 aa30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 TSPY3P0CV98 308 aa30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 TSPY8P0CW00 308 aa30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 CRACR2BQ8N4Y2 399 aaPredicted RBP30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 SCAND2PQ9GZW5 306 aaPredicted RBP30.68■■■□□ 2.5
TM6SF1-202ENST00000322019 NFIAQ12857 509 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 KRT40Q6A162 431 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 HHIPL2Q6UWX4 724 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 C16orf86Q6ZW13 317 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 ZNF444Q8N0Y2 327 aaPredicted RBP30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 USP28Q96RU2 1077 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 FOCADQ5VW36 1801 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 SYCE3A1L190 88 aa30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 RBM5P52756 815 aaKnown RBP eCLIP30.67■■■□□ 2.5
TM6SF1-202ENST00000322019 CCDC196A0A1B0GTZ2 297 aa30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 RCAN1P53805 252 aa30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 KIF23Q02241 960 aaPredicted RBP30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 SUPT20HQ8NEM7 779 aa30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 MYH15Q9Y2K3 1946 aa30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 STK36Q9NRP7 1315 aa30.66■■■□□ 2.5
TM6SF1-202ENST00000322019 COL4A5P29400 1685 aa30.65■■■□□ 2.5
TM6SF1-202ENST00000322019 SLURP2P0DP57 97 aa30.65■■■□□ 2.5
TM6SF1-202ENST00000322019 ELP1O95163 1332 aa30.65■■■□□ 2.5
TM6SF1-202ENST00000322019 L1TD1Q5T7N2 865 aaKnown RBP30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 TRIM22Q8IYM9 498 aa30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 ZFPM1Q8IX07 1006 aa30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 KLHL34Q8N239 644 aa30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 ZDHHC15Q96MV8 337 aa30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 MTMR7Q9Y216 660 aa30.64■■■□□ 2.5
TM6SF1-202ENST00000322019 SRCAPQ6ZRS2 3230 aa30.63■■■□□ 2.49
TM6SF1-202ENST00000322019 RTKN2Q8IZC4 609 aa30.63■■■□□ 2.49
TM6SF1-202ENST00000322019 PGBD1Q96JS3 809 aa30.63■■■□□ 2.49
TM6SF1-202ENST00000322019 MTFR1LQ9H019 292 aa30.63■■■□□ 2.49
TM6SF1-202ENST00000322019 KCNJ14Q9UNX9 436 aa30.63■■■□□ 2.49
TM6SF1-202ENST00000322019 KIF13BQ9NQT8 1826 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 DDAH1O94760 285 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 FUT2Q10981 343 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 CFAP45Q9UL16 551 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 RAD17O75943 681 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 ZNF445P59923 1031 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 LARGE2Q8N3Y3 721 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 KAT14Q9H8E8 782 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 STX8Q9UNK0 236 aa30.62■■■□□ 2.49
TM6SF1-202ENST00000322019 POLD1P28340 1107 aa30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 FKBP1AP62942 108 aaKnown RBP30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 TCP10Q12799 353 aa30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 TRIM29Q14134 588 aa30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 RASGRP2Q7LDG7 609 aa30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 PSMD1Q99460 953 aa30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 OSBPL5Q9H0X9 879 aaPredicted RBP30.61■■■□□ 2.49
TM6SF1-202ENST00000322019 PSDA5PKW4 1024 aaPredicted RBP30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 CALM1P0DP23 149 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 CALM2P0DP24 149 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 CALM3P0DP25 149 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 LIG1P18858 919 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 PNMA1Q8ND90 353 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 PIBF1Q8WXW3 757 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 SHISA4Q96DD7 197 aa30.6■■■□□ 2.49
TM6SF1-202ENST00000322019 DEXIO95424 95 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 TMTC3Q6ZXV5 915 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 DGKHQ86XP1 1220 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 SRBD1Q8N5C6 995 aaKnown RBP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 CTCFLQ8NI51 663 aaPredicted RBP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 PIM2Q9P1W9 311 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 CLIC4Q9Y696 253 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 V9GY48 417 aaPredicted RBP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 BAZ2BQ9UIF8 2168 aaKnown RBP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 XRCC6P12956 609 aaKnown RBP eCLIP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 MYSM1Q5VVJ2 828 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 ZNF396Q96N95 335 aaPredicted RBP30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 ZNF287Q9HBT7 754 aa30.59■■■□□ 2.49
TM6SF1-202ENST00000322019 RBM28Q9NW13 759 aaKnown RBP30.58■■■□□ 2.49
TM6SF1-202ENST00000322019 GOLGA6L4A6NEF3 574 aa30.58■■■□□ 2.49
TM6SF1-202ENST00000322019 PKN1Q16512 942 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms