RNA–Protein interactions for RNA: ENST00000320954.10

CRTAP-201, Transcript of cartilage associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CRTAP, Length 6,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-201ENST00000320954 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 KCNG4Q8TDN1 519 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 STAMQ92783 540 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 PRPHP41219 470 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 SEL1L2Q5TEA6 688 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 TRIM7Q9C029 511 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
CRTAP-201ENST00000320954 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
CRTAP-201ENST00000320954 TACC1O75410 805 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ADCY7P51828 1080 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 FOXD4Q12950 439 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 SMC6Q96SB8 1091 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 BICDL2A1A5D9 508 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 SAT1P21673 171 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 BCAMP50895 628 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 DCLK2Q8N568 766 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 SPATA5Q8NB90 893 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ZAP70P43403 619 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 SDR42E1Q8WUS8 393 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 TFAP4Q01664 338 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ITIH3Q06033 890 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 SNX29Q8TEQ0 813 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 LMBR1Q8WVP7 490 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 VPS16Q9H269 839 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■■■■ 27.7
CRTAP-201ENST00000320954 PTPROQ16827 1216 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 ARMC9Q7Z3E5 817 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 UBLCP1Q8WVY7 318 aaPredicted RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
CRTAP-201ENST00000320954 GPATCH8Q9UKJ3 1502 aaKnown RBP13.03□□□□□ -0.32
CRTAP-201ENST00000320954 EXOC3O60645 756 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.32
CRTAP-201ENST00000320954 AK2P54819 239 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 PLCB4Q15147 1175 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 NOX5Q96PH1 765 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.02□□□□□ -0.32
CRTAP-201ENST00000320954 V9GYY5 206 aaPredicted RBP13.02□□□□□ -0.32
CRTAP-201ENST00000320954 GPAA1O43292 621 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 KIF5AQ12840 1032 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 DCAF15Q66K64 600 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.32
CRTAP-201ENST00000320954 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.32
CRTAP-201ENST00000320954 BEND3Q5T5X7 828 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 KRT27Q7Z3Y8 459 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
CRTAP-201ENST00000320954 ZNF532Q9HCE3 1301 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 OSBPP22059 807 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 STIM2Q9P246 746 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 CALUO43852 315 aaPredicted RBP13.02□□□□□ -0.33
CRTAP-201ENST00000320954 NUCB1Q02818 461 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 ATRIPQ8WXE1 791 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 DDX12PQ92771 950 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 TRPM2O94759 1503 aa13.02□□□□□ -0.33
CRTAP-201ENST00000320954 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 PPEF1O14829 653 aaPredicted RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 GAS7O60861 476 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 CYP2J2P51589 502 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 LIN9Q5TKA1 542 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 DNM3Q9UQ16 869 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 KCTD2Q14681 263 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 CALCRLQ16602 461 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 CERKLQ49MI3 558 aaPredicted RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 ERFEQ4G0M1 354 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 HERC4Q5GLZ8 1057 aaPredicted RBP13.01□□□□□ -0.33
CRTAP-201ENST00000320954 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 DNAI1Q9UI46 699 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 TNNI3KQ59H18 835 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 FPGT-TNNI3KV9GXZ4 949 aa13.01□□□□□ -0.33
CRTAP-201ENST00000320954 GSDMDP57764 484 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms